Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
---|---|---|---|---|---|---|---|---|
ENST00000489959 | carcinoembryonic antigen-related cell adhesion molecule pseudogene 10 | processed transcript | ENST00000509318 | 706 | 348 | noncoding | Trans | |
ENST00000578119 | DSG1 antisense RNA 1 | antisense | ENST00000509318 | 668 | 287 | noncoding | Trans | |
ENST00000582217 | myosin ID | processed transcript | ENST00000509318 | 838 | 349 | noncoding | Trans |
>ENST00000582217 (573 nt)
AATCAAGCCCGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGCTGCCGCCTTGCAGTTGGATCTCAGACTGCTGTGCTAGCAATCAGCGAGACTCCGTGG
GCGTAGGACCCTCCGAGCCAGGTGTGGGATATAATCTCGTGGTGCGCCGTTTTTTAAGCGGGTCTGAAAAACGCAATATTCGGGTGGGAGTGACTCGATT
TTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCAGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAAGTGAGGCAATGCCTCGCCCTGCTTCGGCTCG
CGCACCCACTGACCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCA
TGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTTGGCCATCTTGGCTCCTCCCCCCAGGACCTAAATATTAGGATTCTGGAAACCAAAATGGAGGAAATG
ATGATAAGACTAAGAATGCTGAGAGGAACTATTTAAATGTTTTACCTGGGGAATTTTATATTACACGGCATTCT
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.