Detailed information on ENST00000509318

lncRNA-RNA interactions

Number of interactions: 3

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000489959 carcinoembryonic antigen-related cell adhesion molecule pseudogene 10 processed transcript ENST00000509318 706 348 noncoding Trans
ENST00000578119 DSG1 antisense RNA 1 antisense ENST00000509318 668 287 noncoding Trans
ENST00000582217 myosin ID processed transcript ENST00000509318 838 349 noncoding Trans

Sequence

>ENST00000582217 (573 nt)
AATCAAGCCCGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGCTGCCGCCTTGCAGTTGGATCTCAGACTGCTGTGCTAGCAATCAGCGAGACTCCGTGG
GCGTAGGACCCTCCGAGCCAGGTGTGGGATATAATCTCGTGGTGCGCCGTTTTTTAAGCGGGTCTGAAAAACGCAATATTCGGGTGGGAGTGACTCGATT
TTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCAGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAAGTGAGGCAATGCCTCGCCCTGCTTCGGCTCG
CGCACCCACTGACCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCA
TGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTTGGCCATCTTGGCTCCTCCCCCCAGGACCTAAATATTAGGATTCTGGAAACCAAAATGGAGGAAATG
ATGATAAGACTAAGAATGCTGAGAGGAACTATTTAAATGTTTTACCTGGGGAATTTTATATTACACGGCATTCT

Expression



Full and truncated open reading frames discovered in ENST00000582217

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.