Detailed information on ENST00000513036

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00095053 epithelial membrane protein 2 novel protein coding ENST00000513036 570 242 UTR3 Trans
TCONS_00195633 aspartylglucosaminidase novel protein coding ENST00000513036 518 240 UTR3 Trans

Sequence

>TCONS_00195633 (1847 nt)
ATTATAGTACCTGACACCTAATAGGTGTTTAGTAAATATTTCGAATGAAATTGAGTTTCTTTTCTATTATTCATGCTCATTCTTTAAGCACAGAATATTA
GAATTGGAAAGGGAGAACTGTCCATTTTGATGAGTATCACCAGTCAAGGTGTTACCAAAAAAAGAAATGAGAGGGAAGCACGTGCAAGCTCTTTTTTTTT
TCCCATTTTTATTTTCCTGTCTTTGTAGGTTACCTTTTTCTTTTCCTCTTTGCCCTCTTTAGTTTTCTACCTTATTTTTTATTCTATTTCTTTATTTTCT
TTTTTGAAATGGAGCCTCTCGGTCTGTCGCCCAGGCTGGAGTGCAGTGACTTGATCTCAGCTCACTGCAACCTCCGCCTCCTGGGTTCAGGCAATTCTCC
TGCCTCAGCCTCCTGAGTAGCTGGGATACAGACACCCGCCACCACGCTTGTCTAATTTTTGTACTTTTAGTAGAGATGAGGTTTCACCGTGTTGGCCAGG
CTGGTCTCGAACTCCTGACCTCAGGTGATCTGCCTGTCTCAGCCTCCCAAAGTGCTGGGATTACTGCACCTGGCTTTAGTTTTCTACCTTAGACATGAAT
GTTCTGGTAATTGTCTGCTCATAGTTGGCGCCCAGTGCTGAAGAGCCTGCTCTAGATGGTCTCAGGCAGGAAAGATCAGATAGTAAATGTTGGGCTCTGT
GGACCCATGAAGTCCTTGTCAAAACTACCTAACACTGCCTGCTCTTGGAGCATAATAGGTATAGACAAATGGGCATGCCTGTGTTCTAATAAAACTTTCC
TTATGGATACTGAAGTTTGAATTTTACATGCTACTCATGCTTCACGGAATGTTTTTTGTATGATATTTTTTCTTTCTAATTAAAGATAAATAAACCATTT
TGGATTCACAGACCTTACAAATAGAGGCTATGAGTTGGATTTGGCCCACAGGCAGCAGTTTGCTTATCTCTGCTTTTATCAGACAGTGATAAATAAGTAT
AGCCATAGAATGAAAAGTAAAAGGGAGGCCTGCCTCTTCCTAATTATGTAGGTAGCTTTACAACTAGCAAGTCAGAAGCATTGTATTAATAATATACTGG
GTTTTGGTTTCAGGTGGCACATTTAGAACGAACAGGGCATTACTTAACTGTGAAAGATAACCAGGTGGTTCAGTTGCATCCCTCTACTGTTCTTGACCAC
AAACCTGAATGGGTGCTTTATAATGAGTTTGTTCTAACAACAAAGAATTACATCCGGACATGTACAGATATCAAGCCAGAATGGTTGGTGAAAATTGCCC
CTCAATATTATGACATGAGCAATTTCCCACAGTGTGAAGCAAAGAGACAGTTGGACCGCATCATTGCCAAACTTCAATCCAAGGAATATTCACAGTACTG
AATTCAGTGCTTAGAACTGAAGTTATTGAGAGGACAGCTTTAAAAGATGAATGAACTCAAAAGTTCGAGTTGTGCTCTTCACGTTGGTTCGATAATGGCC
TTTATTTGAAAGCTTTTTAATTTTTCTTTACAGTAAATATTCCATTCTGATTTCATAAATTAAACATTTATGCCTCCCTTTTGTGTTGACACTGTAGCTC
ATACTGGAAAAGTCGATCAATGTTTTGCAGTTTATTGAAAGTAGTTCTATATATAACAATGTTATAAGCATTTCTTTAGAAATGGTTGAAAATGCTTCTA
AAATGTGATTATCGACCATGGTATGCATGATCGTTGTAATTGTTGACATTCCTTTTAGAAGTTGTGAAATGTTACAACTTGTGCTTATGTAGACACAATC
TTCTGTCTCAGTACAGAGGCACTGACTTCAATAAAGTCTATTTATACT

Expression



Full and truncated open reading frames discovered in TCONS_00195633

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.