Detailed information on ENST00000513127

lncRNA-RNA interactions

Number of interactions: 5

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000507831 amyloid beta (A4) precursor protein-binding, family B, member 2 processed transcript ENST00000513127 1182 399 noncoding Cis
ENST00000508593 amyloid beta (A4) precursor protein-binding, family B, member 2 protein coding ENST00000513127 1182 399 CDS Cis
ENST00000514920 amyloid beta (A4) precursor protein-binding, family B, member 2 protein coding ENST00000513127 1182 399 CDS Cis
ENST00000543538 amyloid beta (A4) precursor protein-binding, family B, member 2 protein coding ENST00000513127 1182 399 CDS Cis
TCONS_00192137 amyloid beta (A4) precursor protein-binding, family B, member 2 novel protein coding ENST00000513127 1182 399 UTR3 Cis

Sequence

>TCONS_00192137 (476 nt)
TTTATCACCAAGAACTTATTTTAATGGAAATGGGTCTAATGTCCCTTCATGCAACAAGACAGATGAACAAAAAACAATGGTGACAGTGTGACAGTTTGAT
TCAAGACAAGGCGTGAGAGTAAACAGCAGACCTCACCCTCCTCGGAGGGCGAACGCCTCCTGTGAGCTCCCGCACACTTGCAAAGTGGAAAGACAATAAA
CATTTCACATACCGACTGGTTTGTCTACAGGTAACATGCCCAAGTACTGCACGTGGAACTTCTGGACCAGCTCAGTCTTTGGTGTTGGAAAATCTACTAC
AGGGAACAAAAGCAACACATCTTTCTCAGTGGTTCCAACACACATGTACACAACAGCCGTGGCTCTGCATCATCTGAATGCTCAGGACACGCCCTGTGCC
ATAACGCCCTATGTTTCTGGATGTAAATGTAACAACTATTCTACAAGAGCAGCATTACTCCAGATATTGGGGCTCTG

Expression



Full and truncated open reading frames discovered in TCONS_00192137

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.