Detailed information on ENST00000513542

lncRNA-RNA interactions

No interactions found for this lncRNA.

Sequence

>ENST00000513542 (480 nt)
GAGGATCATGTCTGCATCTTAAAAGATCCCTTTCTGTAGACAATGGACTGAAGGGGGTGACCAGTCAGGAGGCAGTTGCTGCATTGCAAGATGAAATGCT
GGAAGTGGTAGGGATTGATGCAGACCTCCTTCTGCTTGGAACCAAAAGGAAACTCACAGCATTCCAGTGGTTTTAGTTCATGGTGGCTCTGAAGATCGGG
CCAGCGCCACACACGGCAGTAAATGACATGAGGCAGTCCCTTCCGGTGGGAGACTTGCAGCCTGCCATCCAGAGAGCGGGGAATGGTGACACAGTTACTC
GGTTGCCCTGGGCAGCTCAAGGCCTTTTCCAGTTCCTCCATGGCACCTTTCTTTTTCTTCAGTTTTTTCACCAAAGCATCAACAGCTTTCTCTGCCCATT
TTTCTTCTTCATCGCCCTGTTTCCACCCAAGAAGTCTCTTCACAGCTGGACTTGTAAAGGAAAATAAACTTGTCACATTCA

Expression



Full and truncated open reading frames discovered in ENST00000513542

In silico ORF/peptide predictions
>peptide 1 (95 aa)
MVALKIGPAPHTAVNDMRQSLPVGDLQPAIQRAGNGDTVTRLPWAAQGLFQFLHGTFLFLQFFHQSINSFLCPFFFFIALFPPKKSLHSWTCKGK

>peptide 2 (66 aa)
MVTQLLGCPGQLKAFSSSSMAPFFFFSFFTKASTAFSAHFSSSSPCFHPRSLFTAGLVKENKLVTF

>peptide 3 (57 aa)
GSCLHLKRSLSVDNGLKGVTSQEAVAALQDEMLEVVGIDADLLLLGTKRKLTAFQWF


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

Best hit to NONCODE v4:
NONHSAT098631 (Evalue: 0)

Best hit to Swiss-Prot:
sp|P70340|SMAD1_MOUSE (Evalue: 5e-66)