| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000330676 | TLC domain containing 2 | protein coding | ENST00000515210 | 619 | 299 | UTR3 | Trans | |
| ENST00000439138 | transmembrane protein 98 | protein coding | ENST00000515210 | 559 | 280 | UTR5 | Trans | |
| ENST00000478730 | ORAI calcium release-activated calcium m... | protein coding | ENST00000515210 | 601 | 278 | UTR3 | Trans | |
| ENST00000482603 | glyoxylate reductase/hydroxypyruvate red... | processed transcript | ENST00000515210 | 567 | 279 | noncoding | Trans | |
| TCONS_00009834 | SRY (sex determining region Y)-box 13 | novel protein coding | ENST00000515210 | 621 | 293 | UTR3 | Trans | |
| TCONS_00011236 | solute carrier family 35, member F3 | novel protein coding | ENST00000515210 | 614 | 298 | UTR3 | Trans | |
| TCONS_00020768 | processed_transcript | novel protein coding | ENST00000515210 | 631 | 300 | UTR5 | Trans | |
| TCONS_00030591 | cytoplasmic polyadenylation element bind... | novel protein coding | ENST00000515210 | 618 | 312 | UTR3 | Trans | |
| TCONS_00095053 | epithelial membrane protein 2 | novel protein coding | ENST00000515210 | 539 | 277 | UTR3 | Trans | |
| TCONS_00095053 | epithelial membrane protein 2 | novel protein coding | ENST00000515210 | 612 | 296 | UTR3 | Trans | |
| TCONS_00098643 | fatty acid 2-hydroxylase | novel protein coding | ENST00000515210 | 612 | 287 | UTR5 | Trans | |
| TCONS_00098644 | fatty acid 2-hydroxylase | novel protein coding | ENST00000515210 | 600 | 284 | UTR3 | Trans | |
| TCONS_00098644 | fatty acid 2-hydroxylase | novel protein coding | ENST00000515210 | 612 | 287 | UTR3 | Trans | |
| TCONS_00098645 | fatty acid 2-hydroxylase | novel protein coding | ENST00000515210 | 600 | 284 | UTR3 | Trans | |
| TCONS_00098645 | fatty acid 2-hydroxylase | novel protein coding | ENST00000515210 | 612 | 287 | UTR3 | Trans | |
| TCONS_00098647 | fatty acid 2-hydroxylase | novel protein coding | ENST00000515210 | 600 | 284 | UTR3 | Trans | |
| TCONS_00098647 | fatty acid 2-hydroxylase | novel protein coding | ENST00000515210 | 612 | 287 | UTR3 | Trans | |
| TCONS_00118582 | centrosomal protein 76kDa | novel protein coding | ENST00000515210 | 604 | 278 | UTR3 | Trans | |
| TCONS_00132233 | zinc finger protein 43 | novel protein coding | ENST00000515210 | 628 | 296 | UTR5 | Trans | |
| TCONS_00165341 | TTC28 antisense RNA 1 | novel protein coding | ENST00000515210 | 618 | 292 | UTR5 | Trans | |
| TCONS_00186316 | KIAA0232 | novel protein coding | ENST00000515210 | 615 | 305 | UTR3 | Trans | |
| TCONS_00192322 | tec protein tyrosine kinase | novel protein coding | ENST00000515210 | 617 | 289 | UTR5 | Trans | |
| TCONS_00192322 | tec protein tyrosine kinase | novel protein coding | ENST00000515210 | 603 | 270 | UTR5 | Trans | |
| TCONS_00192331 | tec protein tyrosine kinase | novel protein coding | ENST00000515210 | 603 | 270 | UTR3 | Trans | |
| TCONS_00213738 | enoyl-CoA delta isomerase 2 | novel protein coding | ENST00000515210 | 642 | 301 | UTR3 | Trans | |
| TCONS_00235205 | epithelial splicing regulatory protein 1 | novel protein coding | ENST00000515210 | 647 | 299 | UTR3 | Trans | |
| TCONS_00235219 | epithelial splicing regulatory protein 1 | novel protein coding | ENST00000515210 | 647 | 299 | UTR3 | Trans | |
| TCONS_00235231 | epithelial splicing regulatory protein 1 | novel protein coding | ENST00000515210 | 647 | 299 | UTR3 | Trans | |
| TCONS_00240685 | metastasis suppressor 1 | novel protein coding | ENST00000515210 | 511 | 235 | UTR3 | Trans | |
| TCONS_00240688 | metastasis suppressor 1 | novel protein coding | ENST00000515210 | 629 | 280 | UTR3 | Trans | |
| TCONS_00247058 | UDP-Gal:betaGlcNAc beta 1,4- galactosylt... | novel protein coding | ENST00000515210 | 612 | 296 | UTR3 | Trans | |
| TCONS_00252827 | discs, large homolog 3 (Drosophila) | novel protein coding | ENST00000515210 | 626 | 298 | UTR5 | Trans |
>ENST00000515210 (591 nt)
ATTCTGTTCCTTAGAAGTGAGTCACTAAGACCATCCCACACTGAGTGGGGTATTAGGGCTTAGGCACCACTTTTTGAAAGGAGGAATGCTAAATAATTTT<br />CAGGCTTTTTTTTTTTTTGGCAGCAGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCTTGATCTCGGCTCTCTGCAACCTCTGCCTCCCGGGTTC<br />AAGCGATTCTCCTGCCTCAGCCTCCCGAGTATCTGGGATTACAGGCATGCACCACCACACTTGGCTAATTTTTTTGTATTTTTAGTAGAGACAGGGTTTC<br />ACCATGTTGGCCAGGCTAGTCTCAAACTCCTGACCTCAAGAGATTCACCTGCCTTGGCCTCCCAAAGTGCTGGAATTACAGGCATGAGCCACTGCACCCA<br />GCCTCAGGTTTATTTTTTCAATTACTATGGGATGTCAGAGAGGGAAAAACAAGCCATTAGGTGGTTGCAGTCAGCAGCAGGTGGATCGTGAAGACCTCAG<br />CATGCCATTGCAATCTGTAGAGATCATCCAGCCCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACA
In silico ORF/peptide predictions
>peptide 1 (55 aa)
MGCQRGKNKPLGGCSQQQVDREDLSMPLQSVEIIQPLLELDQNRSKLKLYIGHLT
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.