| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000439138 | transmembrane protein 98 | protein coding | ENST00000518164 | 532 | 278 | UTR5 | Trans | |
| ENST00000482603 | glyoxylate reductase/hydroxypyruvate reductase | processed transcript | ENST00000518164 | 613 | 274 | noncoding | Trans | |
| ENST00000620139 | melanoregulin | protein coding | ENST00000518164 | 584 | 275 | UTR3 | Trans | |
| TCONS_00075844 | forkhead box N3 | novel protein coding | ENST00000518164 | 515 | 274 | UTR3 | Trans | |
| TCONS_00075845 | forkhead box N3 | novel protein coding | ENST00000518164 | 515 | 274 | UTR3 | Trans | |
| TCONS_00095053 | epithelial membrane protein 2 | novel protein coding | ENST00000518164 | 563 | 265 | UTR3 | Trans | |
| TCONS_00098643 | fatty acid 2-hydroxylase | novel protein coding | ENST00000518164 | 601 | 276 | UTR5 | Trans | |
| TCONS_00098644 | fatty acid 2-hydroxylase | novel protein coding | ENST00000518164 | 601 | 276 | UTR3 | Trans | |
| TCONS_00098645 | fatty acid 2-hydroxylase | novel protein coding | ENST00000518164 | 601 | 276 | UTR3 | Trans | |
| TCONS_00098647 | fatty acid 2-hydroxylase | novel protein coding | ENST00000518164 | 601 | 276 | UTR3 | Trans | |
| TCONS_00101169 | myosin phosphatase Rho interacting protein | novel protein coding | ENST00000518164 | 521 | 270 | UTR3 | Trans | |
| TCONS_00116668 | desmoglein 3 | novel protein coding | ENST00000518164 | 577 | 278 | UTR3 | Trans | |
| TCONS_00124891 | zinc finger protein 540 | novel protein coding | ENST00000518164 | 611 | 263 | UTR5 | Trans | |
| TCONS_00203985 | family with sequence similarity 169, member A | novel protein coding | ENST00000518164 | 605 | 274 | UTR5 | Trans | |
| TCONS_00240045 | zinc finger protein 706 | novel protein coding | ENST00000518164 | 603 | 277 | UTR3 | Trans | |
| TCONS_00240046 | zinc finger protein 706 | novel protein coding | ENST00000518164 | 603 | 277 | UTR5 | Trans |
>TCONS_00240046 (1127 nt)
TTTCCTTTCTCGTTCCCCGGCCATCTTAGCGGCTGCTGTTGGTTGGGGGCCGTCCCGCTCCTAAGGCAGGAAGATGGTGGCCGCAAAGAAGACGAAAAAG
TCGCTGGAGTCGATCAACTCTAGGCTCCAACTCGTTATGAAAAGTGGGAAGTACGTCCTGGGGTACAAGCAGACTCTGAAGATGATCAGACAAGGCAAAG
CGAAATTGGTCATTCTCGCTAACAACTGCCCAGCTTTGAGAGTCTTGCTGTGTCGCCCAGGCTGGAGTACAATGGCGCGATCTTGGCTTACTGCAACTTC
TGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCACATGCCACCATGCCTGGCTAATTTTTGTATTTTTAGTAG
AGACGGGGTTTCACCATCTTGGCCAAGCTGATTTCGAACTCCTGACCTTGTGATCCACCCACCTCGGCCTCCAAAATGTTGGGATTACAGGCGTGAGCCA
CCGTGCTGGGCCAGATGATCTCATTTCAAACAATCCACAATCTGTGATAAACATTCTGTTTTATATATCAAGCAGCTGTCTAATCTTTAAAAGTGAGGCA
CAACAATATAAGCATGTAGAGACACACACATGCAAAACCATTTCTATGCCTGGCCAGTATAAAATGCTTAACGTCATAGTGTGTGTGGTGTGTGTGTGTG
TGTGTGCGTGAGTGCGCACATGTTGGGGGATTGGGTTCTTCTGTTTCTCCATTAAGTGCTTTTCCTCATCACTCAACCTATCGATCTTTTATTAGTGAAA
GAGGAAAAGGCCAACTCAAAGCTTCATTTACATTCATAGTCTGTTCCTGAGTGAACCAAAAAAAGACTCAGGCAGCATGCATGTGGCTCTTCAGCAGATT
TCAAAAATACTGAAATAATTTTCCAGCAGTGAGTCTGTTTTCTCCTCCTTTCTGTACACATTTTTCTTACAGAACAAAACTAGCACTTGCAACCCCCACA
CATAGAATGGCATCCAGAAGGCTTCTCCAGGAAACACAAAACAAAGTAGAGTGGAAAAGCATCAGGGAGAGCAGGGCCCAGGTATTTGCTTTCAGACACA
GGAAGGACAGCCCCACTTATTAGACTAT
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.