| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000276431 | tumor necrosis factor receptor superfamily, member 10b | protein coding | ENST00000518795 | 564 | 284 | UTR3 | Trans | |
| ENST00000357613 | transmembrane protein 170A | protein coding | ENST00000518795 | 600 | 271 | UTR3 | Trans | |
| ENST00000448612 | WD repeat domain 27 | protein coding | ENST00000518795 | 554 | 300 | CDS | Trans | |
| ENST00000450928 | antisense | antisense | ENST00000518795 | 530 | 289 | noncoding | Trans | |
| ENST00000511184 | E74-like factor 2 (ets domain transcription factor) | nonsense mediated decay | ENST00000518795 | 625 | 287 | CDS_UTR | Trans | |
| ENST00000549365 | DNA-damage regulated autophagy modulator 1 | nonsense mediated decay | ENST00000518795 | 582 | 279 | CDS_UTR | Trans | |
| ENST00000568559 | transmembrane protein 170A | nonsense mediated decay | ENST00000518795 | 600 | 271 | UTR3 | Trans | |
| ENST00000569540 | transmembrane protein 170A | protein coding | ENST00000518795 | 600 | 271 | UTR3 | Trans | |
| ENST00000620139 | melanoregulin | protein coding | ENST00000518795 | 593 | 291 | UTR3 | Trans | |
| TCONS_00001594 | lincRNA | novel protein coding | ENST00000518795 | 617 | 278 | UTR5 | Trans | |
| TCONS_00027001 | programmed cell death 4 (neoplastic transformation inhibitor) | novel protein coding | ENST00000518795 | 636 | 279 | UTR3 | Trans | |
| TCONS_00027009 | programmed cell death 4 (neoplastic transformation inhibitor) | novel protein coding | ENST00000518795 | 636 | 279 | UTR3 | Trans | |
| TCONS_00030130 | calcium/calmodulin-dependent protein kinase II gamma | novel protein coding | ENST00000518795 | 666 | 284 | UTR3 | Trans | |
| TCONS_00030591 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | ENST00000518795 | 626 | 285 | UTR3 | Trans | |
| TCONS_00034643 | CD82 molecule | novel protein coding | ENST00000518795 | 614 | 284 | UTR3 | Trans | |
| TCONS_00065093 | UBA domain containing 2 | novel protein coding | ENST00000518795 | 657 | 285 | UTR5 | Trans | |
| TCONS_00065094 | UBA domain containing 2 | novel protein coding | ENST00000518795 | 626 | 300 | UTR5 | Trans | |
| TCONS_00065094 | UBA domain containing 2 | novel protein coding | ENST00000518795 | 657 | 285 | UTR5 | Trans | |
| TCONS_00065097 | UBA domain containing 2 | novel protein coding | ENST00000518795 | 626 | 300 | UTR3 | Trans | |
| TCONS_00065103 | UBA domain containing 2 | novel protein coding | ENST00000518795 | 626 | 300 | UTR5 | Trans | |
| TCONS_00065103 | UBA domain containing 2 | novel protein coding | ENST00000518795 | 657 | 285 | UTR5 | Trans | |
| TCONS_00098745 | transmembrane protein 170A | novel protein coding | ENST00000518795 | 600 | 271 | UTR3 | Trans | |
| TCONS_00109427 | serine hydroxymethyltransferase 1 (soluble) | novel protein coding | ENST00000518795 | 605 | 275 | UTR3 | Trans | |
| TCONS_00118358 | l(3)mbt-like 4 (Drosophila) | novel protein coding | ENST00000518795 | 610 | 272 | UTR3 | Trans | |
| TCONS_00118361 | l(3)mbt-like 4 (Drosophila) | novel protein coding | ENST00000518795 | 610 | 272 | UTR3 | Trans | |
| TCONS_00119512 | zinc finger and BTB domain containing 7C | novel protein coding | ENST00000518795 | 618 | 278 | UTR3 | Trans | |
| TCONS_00123889 | ribosomal protein SA pseudogene 58 | novel protein coding | ENST00000518795 | 624 | 277 | UTR5 | Trans | |
| TCONS_00123899 | ribosomal protein SA pseudogene 58 | novel protein coding | ENST00000518795 | 624 | 277 | UTR5 | Trans | |
| TCONS_00137691 | FOS-like antigen 2 | novel protein coding | ENST00000518795 | 604 | 281 | UTR5 | Trans | |
| TCONS_00141404 | GLI family zinc finger 2 | novel protein coding | ENST00000518795 | 613 | 278 | UTR5 | Trans | |
| TCONS_00147093 | ATPase family, AAA domain containing 2B | novel protein coding | ENST00000518795 | 613 | 287 | UTR3 | Trans | |
| TCONS_00147093 | ATPase family, AAA domain containing 2B | novel protein coding | ENST00000518795 | 612 | 284 | UTR3 | Trans | |
| TCONS_00147100 | ATPase family, AAA domain containing 2B | novel protein coding | ENST00000518795 | 612 | 284 | UTR3 | Trans | |
| TCONS_00147106 | ATPase family, AAA domain containing 2B | novel protein coding | ENST00000518795 | 612 | 284 | UTR3 | Trans | |
| TCONS_00148698 | WD repeat containing planar cell polarity effector | novel noncoding | ENST00000518795 | 631 | 271 | noncoding | Trans | |
| TCONS_00148704 | WD repeat containing planar cell polarity effector | novel protein coding | ENST00000518795 | 631 | 271 | UTR3 | Trans | |
| TCONS_00148705 | WD repeat containing planar cell polarity effector | novel protein coding | ENST00000518795 | 631 | 271 | UTR3 | Trans | |
| TCONS_00168219 | THO complex 5 | novel protein coding | ENST00000518795 | 609 | 254 | UTR3 | Trans | |
| TCONS_00168220 | THO complex 5 | novel protein coding | ENST00000518795 | 609 | 254 | UTR3 | Trans | |
| TCONS_00171146 | F-box and leucine-rich repeat protein 2 | novel noncoding | ENST00000518795 | 600 | 292 | noncoding | Trans | |
| TCONS_00185321 | transferrin receptor | novel protein coding | ENST00000518795 | 600 | 285 | UTR5 | Trans | |
| TCONS_00194682 | E74-like factor 2 (ets domain transcription factor) | novel protein coding | ENST00000518795 | 625 | 287 | UTR3 | Trans | |
| TCONS_00194686 | E74-like factor 2 (ets domain transcription factor) | novel protein coding | ENST00000518795 | 625 | 287 | UTR3 | Trans | |
| TCONS_00202828 | myotubularin related protein 12 | novel protein coding | ENST00000518795 | 621 | 285 | UTR3 | Trans | |
| TCONS_00213191 | tubby like protein 4 | novel protein coding | ENST00000518795 | 629 | 277 | UTR5 | Trans | |
| TCONS_00219475 | WD repeat domain 27 | novel protein coding | ENST00000518795 | 554 | 300 | UTR3 | Trans | |
| TCONS_00234854 | zinc finger and BTB domain containing 10 | novel protein coding | ENST00000518795 | 609 | 263 | UTR3 | Trans | |
| TCONS_00239255 | tumor protein D52 | novel protein coding | ENST00000518795 | 631 | 285 | UTR5 | Trans | |
| TCONS_00239255 | tumor protein D52 | novel protein coding | ENST00000518795 | 654 | 284 | UTR3 | Trans | |
| TCONS_00245543 | long intergenic non-protein coding RNA 963 | novel protein coding | ENST00000518795 | 602 | 272 | UTR3 | Trans | |
| TCONS_00249092 | transmembrane protein 245 | novel protein coding | ENST00000518795 | 639 | 271 | UTR5 | Trans |
>TCONS_00249092 (715 nt)
GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCTAGGCAGACGGATCTCGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATAGTGAAACCCTG
TCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGACACGTGCCTGTAGTACCGGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAAACCGGGAG
GCGGAGGTTGCAGTGAGCCAAGATCGTGCCACTGCACTCTAGCTTGGGCAACAGAGTGAGACTTCATCTCAAAAAAATAAAGAAATAAAATAAAATAAAG
TTTTTTTCATAAGATTTCCTTATTATTTTTTAATATTTGTAGGATCTGTAATGTTGTTCTCCTGATATTGATAATGTATGTTTTTTCTTGATCAGTCTGA
CTTAAGATTTATCCATTGTATTGATCTTTTCACAGAACCAGCTTTTGATTGTGTTTATTTTTGTGTTTTTCATTTTCTATTTCTTTGAGATAGAAAGAAA
TCCTTATTGATTACTATATCTTGCATACAGAAGAGCATTTAGAACACGTGCGTACTTTTCAGAAGAAATATATAGCTAACACCTGGATAATCACCACTCA
GGTTGAGAACTACGACTCTACCCCTTCCAGATGGCATCCTCCTACCTCTCTCCTGGATGTAACCTGTATCCCAAATTCGGGGAAGTCTGGGAAGTTGACG
AGCAGATAGATCACTA
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.