Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
---|---|---|---|---|---|---|---|---|
ENST00000489959 | carcinoembryonic antigen-related cell adhesion molecule pseudogene 10 | processed transcript | ENST00000520365 | 505 | 184 | noncoding | Trans | |
ENST00000582217 | myosin ID | processed transcript | ENST00000520365 | 551 | 185 | noncoding | Trans |
>ENST00000582217 (568 nt)
ATGCCTCACCCTGCTTTGGCTCGCGCACGGTGCGCGCACCCACTGACCTGTGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGG
AAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCAGGCAACCTCTTTTC
TTTATAAATTACTCAATCTCGGGTATTTCTTCATAGCAGCATGAGAATGGACTAATACAAAGTCCTTTGGCTGGAGGCAACAGGAAAAATTCTGACTATC
ATTTCCCATGCTACCCCTCACCTTTCAAATCCTTTACAATATGGGGAGCAGGAGAAAGGCAGATCTTACTTGAGAGGACCGTGAGGGGAGCAAGGTCGAG
AGTCCACATGGAACCCCAAAAACTAGGAGAGCTAGAACAAGGACATTTGATACAAAAAGAAAAATTACTGTCATGTGATGTGTGATCCATGATACCGTCA
TAGTTTTGTTTTGCTGTGCTCCACCTTCATACCTTCGCCTATGTTAGAACTTCTGAGAAGCTGAAGCAT
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.