Detailed information on ENST00000521767

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000568559 transmembrane protein 170A nonsense mediated decay ENST00000521767 534 283 UTR3 Trans
TCONS_00184374 neutral cholesterol ester hydrolase 1 novel protein coding ENST00000521767 817 553 UTR3 Trans

Sequence

>TCONS_00184374 (1762 nt)
CAGAATACCCTCCTGGCAAAGGCCATACATATTATACTGTGTTCTTGCCATAACCATGACATTTCTTTTAGGCTTCCTGATTTGTCTTAAAAATTCATGG
AAGTTTTTGCTTTCTATTCTGTAAAGTATGAATTTAATATAAAATCTAAAAAATATCTAACAGATTACATATCCCTTTTTCCAAGGTGACAAGTAAAAGT
GACTTAGGAAGATAAGGCCGGGTGCGGTGGCTCTCACCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAGATTGCCTGAGGTCAGGAGTTCAAGAC
CAGCCTAGCCAACATGGTGAAACCGTATCTCTACTAAAAAAAAAGTTAAAAGTGGCTGGGCACGGTGGCTCATGCCTGTGATCCCAGCACTTTGGGAGGC
CAAAGCGGGTGGATCACGAGGTCAGGAATTCGAAACCAGCCTGACCAACATGATGAAACCCGTCTCTACGAAAAATAGAAAAATTAGCCAGGCATGATGG
TGGGCGCCTGTAATCCTAGCTGCTCGGGAGGCTGAGGCAAGAGAATAGCTTGAACCCAGGAGGGTGGAGCTTGCAGTGAGCCAAGACCATGCCATTGCAC
TCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAATAAATAAGTAAATAAATAAATAAGCTGGGTGTGGTGGTGAGCACCTGTAATCCCAGCTACT
CGAGAGGCTGAGGCAGGGAGAATTGCTTAAACCCGGGAGACAGAGGTTGCAGTGAGCTGAGATTGCGCCACTGCACTCCAGCCTATGTGACAGAGCGAGC
CTCTGTCTCAAAAAAAAAGAAAAAAAAAGGGAAGATAGGTCACATTTATGCTGTAGTTTCTATCCTGGGGCTAATCTGATACCCAGTTTGAAACTTTGAA
GTGTTTATTATTTTAGATGAAAAGTTGTATTTTTTTCTTCCTAATGAGTTAGGAATTTAGATTAGATACACTCCTAGAGATGTATAAGCTGGTAGGCTGG
GCACTAGAGCTAAACAGCCACTTCTAGAGCCTTTTAATGGTCCAAGCCAAAGACTGTTGAGAGAACTGTATTTTCTTTGCTGATGCTCTTTTCTTCTCTG
GATTTTATGTACTGTTCGTTTATTCCTCTGCCCTGTCTCTGGAGCTACTGCATACTGGTATAGCTTAGTCCATTATAGAAAAATCAAGAACAATGTACAT
TTTTGGTGAAAAGATTTTTGTGAGTATATGTTAAGAGTTGCGTATTTAGTCATGTTTTCTGTTGAATGCAACCAATGTACAATATTGACAGCTTTCACCT
GGCTTTCTGGAGTAAACAGTGAATTTATTGGTGTTCTAGAATCATTAAATTCGCTAGAGAATTTGCTAGTGAATTTGGATTGCTTTCTGAACATTTTTCT
GTTCTTCTGTAGTGCTCCCTCTGAGCATTGTAGAAGTGTTCCAGCACCCCTATGAAGACCACATTCATTTTGTCAGGGAGCCTTTAGTCCACTATCTTGA
ATCATACATGAAGGATCTAGTGATACACTTTTTTAAAGATTTGTATTACCAACTTCTCTGCTCATACTGCATTAGTACTAGCAGGTGCATTGGATATTTA
TTGACTCCAAAACTTGAATGTATTTTGGAAAATGGAGCTGATAGTATCCTGGATCTTGGATTAGTAGACTCCTCAGAAAAGGTACAGCAGGAAAACCGAA
AGCGCCATGGCTCTAGTCGAAGTGTAGTAGATATGGATTTAGATGATACAGATGATGGTGATG

Expression



Full and truncated open reading frames discovered in TCONS_00184374

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.