| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000323699 | delta(4)-desaturase, sphingolipid 1 | protein coding | ENST00000523859 | 517 | 295 | UTR3 | Trans | |
| ENST00000378004 | Rho GTPase activating protein 26 | protein coding | ENST00000523859 | 556 | 282 | UTR3 | Trans | |
| ENST00000391877 | delta(4)-desaturase, sphingolipid 1 | protein coding | ENST00000523859 | 517 | 295 | UTR3 | Trans | |
| ENST00000424496 | sense_intronic | sense intronic | ENST00000523859 | 609 | 281 | noncoding | Trans | |
| ENST00000482603 | glyoxylate reductase/hydroxypyruvate reductase | processed transcript | ENST00000523859 | 586 | 280 | noncoding | Trans | |
| ENST00000620139 | melanoregulin | protein coding | ENST00000523859 | 570 | 281 | UTR3 | Trans | |
| TCONS_00030588 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | ENST00000523859 | 560 | 283 | UTR3 | Trans | |
| TCONS_00095053 | epithelial membrane protein 2 | novel protein coding | ENST00000523859 | 525 | 282 | UTR3 | Trans | |
| TCONS_00101169 | myosin phosphatase Rho interacting protein | novel protein coding | ENST00000523859 | 570 | 279 | UTR3 | Trans | |
| TCONS_00116668 | desmoglein 3 | novel protein coding | ENST00000523859 | 559 | 284 | UTR3 | Trans | |
| TCONS_00116668 | desmoglein 3 | novel protein coding | ENST00000523859 | 559 | 283 | UTR3 | Trans | |
| TCONS_00186683 | TAPT1 antisense RNA 1 (head to head) | novel protein coding | ENST00000523859 | 604 | 280 | UTR3 | Trans | |
| TCONS_00186689 | TAPT1 antisense RNA 1 (head to head) | novel protein coding | ENST00000523859 | 604 | 280 | UTR5 | Trans | |
| TCONS_00253752 | queuine tRNA-ribosyltransferase 1 pseudogene 1 | novel protein coding | ENST00000523859 | 500 | 279 | UTR3 | Trans |
>TCONS_00253752 (695 nt)
GGGGCACCGGGGTCTGCTTTCCGACTCCCTTCCGACTCCGCGCCTGCGCAGGAAGCGATTTGGGGAGTGTTGTGAATTCCGAGGGCTCCACACTTAAGAG
GTTGTACACTCACCTGTCTACCTGGACTCCAATTTCCATATTTCCAGCCACTTGAGGACTGAGAGGTGGATGATAAACCCTGTCATAGTGGAGCAAGTTC
AGGTGTTTAACCGCTGTTATGGGGGATCTGCCTTTTCTCCCTCTTCTTTCTTACTTCCATAAGTATGTATGTGCAGAGATTGAAAAATAACCTTGAGAGA
GTCCATCCATCTAACTCCAGGGAGTCGTGCTCTGTCACCCAGGCTGGAGTGTAGTGGCGCGATCTCTGCTCTGCTCATTGCAACCTCTGCCTCCCTGGTT
CAAGCAATTCTTCTGCCTCAGCCTCCCAAGTAGCTTGGATTACAGGCGCCCGCCACCACACCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCA
CCGTGTTGGCCAAGCTGGTCTCGAACTCCTGACCTCGTGATCCGCCCACCTTGTCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC
AATAAGCTTTTTTCTTAAAAAGTACTCAGAAGACTTTTCTATCCATTCATTCTGTTAACGCGCGTCAGTGTGAAGAGACCACCAAACAGGCTTTGG
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.