| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000361228 | Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 | protein coding | ENST00000528233 | 532 | 298 | UTR3 | Trans | |
| ENST00000395811 | myosin phosphatase Rho interacting protein | protein coding | ENST00000528233 | 573 | 312 | UTR3 | Trans | |
| ENST00000479069 | bone morphogenetic protein receptor, type II (serine/threonine kinase) | processed transcript | ENST00000528233 | 509 | 295 | noncoding | Trans |
>ENST00000479069 (631 nt)
TTTTCATTCCCTAAGAATAAATGTGTACTGATTAATCTCATGGGAGATTGTTTCATAAGCATGTATCATTACATTATTTTCCTTGTAATTAATTTGCTAA
ACGGAGGTGAACAAAGTAGTCCTAAACTAAAATTTATTTACCATTTCTCCTTTAAATACAAAGACAAATATGATCTATTCATGACATTATACCACTGTTT
CTGTTATTTCCCATATTAACTTGGCGTAGTTGTTTAAAACATTCTTTTCTTCTTTGTAGATGAAGAAAATATGACAGTGAAATAACGATTACTATTGATC
AGTCATAGTTGTTTAAAATAATGTCTAATGGGCTGGGTGCGGTGGTTCACACCTGTAATCTCAGCACTTTGGGAAGCCGAGGTGGGCAGATTATGCGGTC
AGGAGATCAAGACCATCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAATAAAAAAAAAAAATTAGCTGGGTTTGGTGGCACACACCTGTAATCCCA
GCTACTCGGGAGGCTGTGGCTGGAGAATCGCTTGAACCAGCAGGTGGAGGTTGCAGTGAGCCAAGATCACGCCACTGTTCTCCAGCCTGGGCAACACAGC
GAGGCTCCGTCTCCAAAAAAAAGAAAAAAAAA
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.