Detailed information on ENST00000529551

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00156217 antisense novel protein coding ENST00000529551 514 461 UTR5 Trans
TCONS_00156217 antisense novel protein coding ENST00000529551 563 526 UTR5 Trans

Sequence

>TCONS_00156217 (895 nt)
AGGCTGAAGGAAGGCAAGGGCTGAAACGGAGACAGGATGCTACTGCAGTACTCCACGTGAAGGCTGGTGGTCGCTTGGACTGAGTCAGAACAGGGAAACT
GATGGGAAGTTGTCGGAGAGTAAATATTTCCAACTACAGTCTGGTGATGGAGTCTGACGCAGGAACCTTCTTACCCACTGGGCTGCAATTCACTGGCAGT
GAAAAGGCCAGGGCCATCATGGAGGAGGTTATGAGCCTGCTGCAGCCCCTCAATATCACTCAGGTCCTGAGCCATGGAGAAGGGACAGACATCAACTTTT
GGATCCAAGCTGGAGTGCCTGGTACTTCTGCATAACTACCCAGTAGAGAAGGATCCTTTCACAAAAGGTGTGGGAAAACTATACTACAAGCCTGCAGTAA
CCAAAATGGCATGTTACGGGTACAAAAACAGACACATAGGCCAATGGAACAGGTTAGAGAAGCCAGAAATAAAGCCACACACCTACAACCATCTGATCTT
TGGCAAAGCCAACAGTAAAAAACAATGGGGAAAGGACTCCCAATTCAATAAATGCTGCTGGGATAACTGACTAGCCATATGCAGAAGATTGAAACTGGAC
TCCTTCCTCTCACCATACATAAAAATCAACCCAAGATTGATTAAAGACTTAAGTGTAAAACCTAAAATTATAAAAATCCTACAAGAAAACCTTGGAAATA
ACATTCTGGACATTGGCCCTGGCAAAGACTTCATGATGAAGACTCCAAAAGCAATTGTAACAAAAACAAAAATCGACAAGTGGGACCTAATTAAAGAGTT
TCTGCACAGTAAAAGAAACTGTCAACAGAGTAAATAGACAACCTACAGAATGGAAGAAAATATTTGCAAACTACGTATCTGACAAAGGTCTAATAT

Expression



Full and truncated open reading frames discovered in TCONS_00156217

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.