| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000524264 | SAP30L antisense RNA 1 (head to head) | antisense | ENST00000530759 | 595 | 243 | noncoding | Trans | |
| TCONS_00119961 | ring finger protein 152 | novel protein coding | ENST00000530759 | 627 | 303 | UTR5 | Trans | |
| TCONS_00135884 | zinc finger protein 347 | novel protein coding | ENST00000530759 | 594 | 243 | UTR5 | Trans |
>TCONS_00135884 (598 nt)
CCGTCGAGGATTAGGATCGAGTTTCTTCGATCGTGAGGGCAATTATTAGTGGCCTCTAGCCCCCCAGATGGCATCTTGAGGAGAGAGAATCCACGCTACG
AGAACTAACATAGTGGACATCGCAGTTGTCCGTAGCCGATTTGCGGGTTACGGAGTTGTTGCAAGTAAAGAAGGGGAAATCCGAGCGTTCTCGCGTTGGA
TTTCCTCCACGTGTGAAGTGGGAATGGTAGTGATATCTCGTGCTATCTCTGTCAAGGGCAAGAAGGAGAAGGAATTTATTTGAGGCCCTACGACGTGGTG
CGGTGGCTCACGCCTGTAATCCCAACACTTTGGGAGGCCGAGGCAGGCGGATCATCTGAGATCGAGAGTTCGAGACCAGCTTGACCAACATGGAGAAACC
CCGTCTCTACTAAAAGTACAAAATTAGCCAGGCATGGTGGCACATGCCCGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAGTAGCTTGAGCCCAGG
AGGCGGAGGTTGTGGTGAGCCGAGATCGCGCCATTGCACAGCCTGGGCAACGAGCGAAACTCCATCTCAAAAAAATAAATAAAAATTTTTTTAAAAAAG
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.