Detailed information on ENST00000531363

lncRNA-RNA interactions

Number of interactions: 3

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000489959 carcinoembryonic antigen-related cell ad... processed transcript ENST00000531363 853 343 noncoding Trans
ENST00000578119 DSG1 antisense RNA 1 antisense ENST00000531363 838 287 noncoding Trans
ENST00000582217 myosin ID processed transcript ENST00000531363 895 348 noncoding Trans

Sequence

>ENST00000531363 (745 nt)
AGACTGCTGTGCTAGCAATCAGCGAGACTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGCGGGATATAATCTCGTGGTGCGACGCTTTTTAAGCCCTTCA<br />GAAAAGCGCAGTGTTCGGGTGGGAGTGACCCGATTTTCCAGGTGCCGCCCGTCACCCCTTTCTTTGACTCAGAAAGGGAACTCCCTGACCCCTTGCGCTT<br />CCCAAGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCGCACCCGCTGACCTGCACCCACTGTCTGGCACTCCTTAGTGAGATGAACCCG<br />GTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCT<br />GTAACAATTTCTTGAGATGAAGATCCTGAATACCAAAGAGGGCCGCTGACAGGTCTAGGAGTACACTTCTAGCACCTAGCAGAGAGAGGCTTCACTACAT<br />CATGCTTCCTGACATCTCTCCCTTTGAAGAGCAGTCAGACTCCTGCTTTGCTCTTCAGACTTAATTTGGGGGTTTAACAGGTGAGGTTGCTGGGGGAACT<br />CTTTTACAACATCTCTCTGAAAGAATCCGGGCTGCCAGTTTCATTTGGTTTGGGTGTCAGTAGCATGATGGAAAGACAAAAAAACACAACTTGACATCTG<br />CAGAAATGGGTTCAAATTTTACCTGCAACTCACCAATTCTGTGGC

Expression



Full and truncated open reading frames discovered in ENST00000531363

In silico ORF/peptide predictions
>peptide 1 (85 aa)
DCCASNQRDSVGVGPSEPGAGYNLVVRRFLSPSEKRSVRVGVTRFSRCRPSPLSLTQKGNSLTPCASQVRQCLALLRLAHGARTR

>peptide 2 (68 aa)
MPRPASARARCAHPLTCTHCLALLSEMNPVPQMEMQKSPVFCVAHAGSCRPELFLFGHLGSSCNNFLR


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

Best hit to NONCODE v4:
NONHSAT018482 (Evalue: 0)