Detailed information on ENST00000531658

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000549365 DNA-damage regulated autophagy modulator 1 nonsense mediated decay ENST00000531658 534 274 UTR3 Trans
ENST00000593250 centrosomal protein 76kDa nonsense mediated decay ENST00000531658 525 304 UTR3 Trans

Sequence

>ENST00000593250 (4257 nt)
ATTTTTAAATAAAAACTGAAAATGAATTTGGGTATTTGGTGTGCTGAAAAGTGAAATTTTTGCCTATTTAAAACTGACCCTAATCTTGGACATTAGTAAT
AAAAGGCACATATTAATAAAAGACACATTGACCTAGATTATGTTTAACAAAACTTTAAGTTATTTAAATTATGCTAACACAGCATATGTAGCACATTTTA
GAAATTCATAGATCTTTTATTTTTCTAGTGTTAAACAATTACTTCAAATTGATTTGTATTGCTACATAAGGCAAAAAACAATTCCTGAACTTTGCAGAAT
GGAAAAATATTTCAACTGCCACATTTACTCTTTTAAAACTGAGAGCTTTAAAGCAGGAGCTCCCAATCCCCGGTACCCATCCCTGGCCTGTTAGAAACTG
GACCACATAGCAGGAGGTGAGTGGCACGCAAGCCAGAGAAGCTTTATCAGTATTTACAGCTGCTCCCAATGGCTTGTATGGCCACCTGAGCTCCGCATCC
TATCAGATCATTGGCAGCATTAAATTCTCATAGGAGCATGAACCCTATTGTGAACTGTGCAAGCCAGGGATCTAGGTTGTGCCTCCTTATGAGAATCTAA
TGCCTGATGATCTGAATTGGAGCTGAGGTGGTAATGGGGAGTGGCTGCAAAAACAGATTAACATTAGCAGAGAGGCTTGACTGCACAGAGACCGTAATCA
ATCAACTGCTTGCAGACTCATATCAAAACCCTCTCAGTGAGTGGCAAGTAACAAGCTGCATCTAGTGGCAGGTTTTAAGTCAGAATCTGACATTTAATCT
GCATGTGGCCTGCCCATTACTTATTTACCACTTCCATCCATGTCTCTTTCCTGCACTGTGCATTTGTCTCAGTCACAGTTTTGGTAAGCCCACAAGCTAA
CCCTAGCCAAAATGAGTAAAAAAACAAACGTCCTTGGAGAGCTTCTTTGAAAAGGGGGAAAGACCCAATGATGAGACAGCAGAAGACTCTAATACTGCCA
ACAAAGAGAAAGTGGCATTTAAAAGAAAATATCAAGAGTCCTACTTAAATTGTAGGTTCATTGCAATAGGTGATTCACATTCTCCAAACCTGCTTTGTCT
AATATGTGATGACCAGCTATCCAGAAAAGCCATGAAACCTTTAAAAGTGCTTCACCACATGGAGACCAAACACCCTGCATTAAAAGACAAGCCTTTGGAG
TTTTTCAAAAGAAAAAATCGTGAACGCAAAGAACAGAAGTAATTATTGAAGGCCACCACTTCATCAAATGTGTCTGCAGTGAGAGCATCATTCTTAGTGG
CTAATCACATTGCTAAAGCTAAGAAGGCCTTTACTACTGGTGAAGAGTTGATCCTGCCTGCTGCTAAGGACATCTGTTGTGAACTCTTAGGAGAGCCTGC
AGTTCAAAAGGTGGCACATGTTCCTCTTCTGGCTAGCACCATAGCTAGATGAATTAATAGAGGATATGAGGCACAGTTGTTAGAATTAATGAGTCACTGT
GGTACCCAATCCAGGTTAATGAGTCTACCAGTGTTGACAGCAAGGCAACAATGCTTGTTTTTGTGTGATACATTTTTCAGGAGGATGTGCATGAGGATAT
ATTATGTGCACTTTTGCTTTCAACCAACACCACAGCTGCAGAACTATTCAAGTCTTTAAATACATATCAGGAAAACTGAATTGGTCATTTTGTATCGATA
TATGCAGGGATGGAGCAGCTGCCATGACTGGACGGCTTTCTGTTTTCACTACTCAGGTCAAAGAGCTTGCTTCTGAATGTGAGTCTGTGTACTGTGTCAT
CTGTAGAGATGCTGGCTAGTTGGAAAATGCCACCTGAACTTACCATTTTGTAGGATGTGCTTAAAATTTTCAACCACATTAAAGTACATGCCCTTAATTC
ACATCTGTTCATGTAGCTCTGTGAGAAGATAGACACAGAGCACACGTCTTCTCTTATACACAGAAGAGAGACGGCTTCCTAAAGGTAGATCACTGGCCAC
TGTTTTTCAGTTACAATAGCTGCTCCAGAGATTTCATTTTAGAAAAAGTCACCACTGGCAGCACATTTCGTTGACACAGAATTGGGTCACAAAATTGCTT
ACTTGGCCAGGCATGGTGGGTCACGCCTGTAATTACAGCACTTTTGGGAGGCCAAGGCAGGCAGATCACTCAAGGCCAGGAGTTTGAGACCAGTCTGGCC
AAAGGGGAGAAACCTCGTCTTTACTAAAAAATACAAAAATTAGCTAGGCATGGTGGCACATGCCTATAATCCCGGCTACTCGGGAGGCTGAGGCACGAGA
ATCACTTGAGCCTGGAAGGCAGAGGTTGCAATGAGCCGAGATCATGCCACTGCACTCCAGCCTGGGCAAGAGAGCGAGACTCCCTCGAAAAAAAAAAAAA
AACTTGCTTACTTGTGTGACATATTCAATCTGTCACCTCAGGGGAGAACAAAACTGTGTTCAAGTTGGCAGATAGAGTGGCTGCATTCAAAGCCAGACTA
GTATTATGGGGGCCACAAGTGAACATTGGGATTTTTTGACATGTTTCAAACATTAGCAGAGATTTTAAAAGAGACTGAGCCAGGACCTTTTTTCTCCCAG
CTGGCACATGATCACCTATCTCAGCCTTCAAAGAGTTTGAGTATTATTTTCCAGCCACGAAAGAGCCCCGAACTGGGAAGGAATGGATTCACAACCCATT
TGTGAATAAGCCAGGTGAATCGACTTTGTTCATGCTAGAAGAGGATCAGCTGCTTAAGATCACAAATGATGTTGCCCTTAAAAGTATGTTTGAGACAACT
TCACATCTCCATACATTCTGGATTAAAGACAAAGTGGAACATCCTGAGATTGCCACGAAAGCACTGGAAAGCCTGCTTCCATTTCCAACCTCCTGTCTTT
GTGAAACAGGGTTTTCTGTAGTGACAGCAGCCAAACAAGATTACAGAGTAGACTGGACATAAGCAACACACTTAGGGTGTCACTGTCTCCCATCACCCCT
AGATGGGACCGTCTAGTTGCAGGGAAAACAAGCTCAGGGCTCCCACTGCTTCTACATTATGGTGAGTTGTACAATTATTTCATTATATATTACGATGTGA
TAATAATAAAGTACACAATAAATGTAATACACTTGAATCATCTCAAAACCACCACCACCCCCCTCCATGGAAAAATTGTTTTCCACAAAACCGGTGCCTG
GTGCCAAAAAGGTTGGAAACTGCTGCTTTAAACTTTTAAGTTGCTCTGATAAACTTGATAAGCAAAGAAAGGCATAAAGAAGAGTCAGTACATGACCATT
TTATTTAGCCATTTGCTGAACAGAAGTGCCTAGCTTTTTTCACTGTTTTTGTTCAAAGATAGATAATTCTGTTTGTTAGAGAGTTTTTATTAGGTGACTA
GAAAAAAATCTTTCAGGATAACATCTACTTATTATAAGTAAGCTAAAACATTTAATACCCAAAGTGCTTAGTAATAAATATTTATGCTATCTCAACATCA
GGCATTTTATTTTCTATTAGGTAACCACCTATGGCATAAATTCTCAAAAGTCATAGTAAAATTAGTCACAATTAGATAAATCAGCCCTGAGTATAATAGC
ATCTGTATTATGGGTTTTTGTGTAAATTATTAATTTGACTGAAACATAACTAAAGTATCCTGGACATGCAGGGGAAGAAGACAAGAAAATTAATGAAGAA
CTGGAGTCTCAATATCAGCAAAGTATGGACAGTAAATTATCAGGAAGATATCGGCGACATTGTGGACTTGGCTTCAGTGAGGTAGAAGACCATGATGGAG
AAGGTGATGTGGCTGGAGATGATGATGATGACGATGATGATTCACCTGATCCTGAAAGTCCAGATGATTCTGAAAGCGATTCAGAGTCAGAGAAAGAAGA
ATCTGCTGAAGAACTCCAAGCTGCTGAGCACCCTGATGAAGTGGAGGATCCCAAAAACAAAAAAGATGCAAAAAGCAATTATAAAATGATGTTTGTTAAA
TCCAGTGGTTCATAACTCCCAAACGCTTAGTCTTTGTATTAAAAGTAAGCCTTATTGTTACAATGCACAGTGGAGGACTGCTTATAGAGCACAGACCTTT
GTATTATAATTTTTAAAAAGGCCCTTTTAAATAATTACAAAGAGTGTTTGCTTTCAAATGCCATGGGTTACACTTTTATGGGCATGACTATAACCATTTT
TGTAAAGAGTAAGAGTTGTATAAAATAAGAAATAAATACAGTACTCAACTTCCTTTCA

Expression



Full and truncated open reading frames discovered in ENST00000593250

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.