| Potential function |
Interacting transcript |
Gene description |
Transcript biotype |
lncRNA id |
Alignment score (LAST) |
Alignment length |
Transcript region involved in interaction |
Genomic orientation of interacting RNAs |
|
|
ENST00000227155 |
CD82 molecule |
protein coding |
ENST00000542698 |
691 |
305 |
UTR3 |
Trans |
|
|
ENST00000307792 |
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E |
protein coding |
ENST00000542698 |
692 |
293 |
UTR3 |
Trans |
|
|
ENST00000327473 |
tumor necrosis factor, alpha-induced protein 8-like 1 |
protein coding |
ENST00000542698 |
638 |
300 |
UTR3 |
Trans |
|
|
ENST00000338983 |
Mitogen-activated protein kinase kinase kinase MLT |
protein coding |
ENST00000542698 |
518 |
309 |
UTR3 |
Trans |
|
|
ENST00000355285 |
adenomatosis polyposis coli down-regulated 1 |
protein coding |
ENST00000542698 |
642 |
299 |
UTR3 |
Trans |
|
|
ENST00000378004 |
Rho GTPase activating protein 26 |
protein coding |
ENST00000542698 |
700 |
303 |
UTR3 |
Trans |
|
|
ENST00000405000 |
pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 |
retained intron |
ENST00000542698 |
666 |
312 |
noncoding |
Trans |
|
|
ENST00000422247 |
centrosomal protein 135kDa |
protein coding |
ENST00000542698 |
677 |
290 |
UTR3 |
Trans |
|
|
ENST00000477205 |
calcium/calmodulin-dependent protein kinase II gamma |
processed transcript |
ENST00000542698 |
695 |
315 |
noncoding |
Trans |
|
|
ENST00000498813 |
delta(4)-desaturase, sphingolipid 1 |
processed transcript |
ENST00000542698 |
571 |
304 |
noncoding |
Trans |
|
|
ENST00000513143 |
podoplanin |
protein coding |
ENST00000542698 |
561 |
303 |
UTR5 |
Trans |
|
|
ENST00000524750 |
CD82 molecule |
protein coding |
ENST00000542698 |
536 |
230 |
UTR3 |
Trans |
|
|
ENST00000547865 |
spermatogenesis associated, serine-rich 2 |
protein coding |
ENST00000542698 |
628 |
309 |
UTR3 |
Trans |
|
|
ENST00000607772 |
CNKSR family member 3 |
protein coding |
ENST00000542698 |
704 |
312 |
UTR3 |
Trans |
|
|
ENST00000607772 |
CNKSR family member 3 |
protein coding |
ENST00000542698 |
565 |
323 |
UTR3 |
Trans |
|
|
ENST00000620139 |
melanoregulin |
protein coding |
ENST00000542698 |
608 |
319 |
UTR3 |
Trans |
|
|
TCONS_00000720 |
lincRNA |
novel protein coding |
ENST00000542698 |
521 |
312 |
UTR3 |
Trans |
|
|
TCONS_00001594 |
lincRNA |
novel protein coding |
ENST00000542698 |
700 |
311 |
UTR5 |
Trans |
|
|
TCONS_00004719 |
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 |
novel protein coding |
ENST00000542698 |
736 |
300 |
UTR3 |
Trans |
|
|
TCONS_00004721 |
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 |
novel protein coding |
ENST00000542698 |
736 |
300 |
UTR3 |
Trans |
|
|
TCONS_00020722 |
processed_transcript |
novel protein coding |
ENST00000542698 |
592 |
307 |
UTR3 |
Trans |
|
|
TCONS_00020723 |
processed_transcript |
novel protein coding |
ENST00000542698 |
592 |
307 |
UTR3 |
Trans |
|
|
TCONS_00020726 |
processed_transcript |
novel protein coding |
ENST00000542698 |
592 |
307 |
UTR3 |
Trans |
|
|
TCONS_00020728 |
processed_transcript |
novel protein coding |
ENST00000542698 |
592 |
307 |
UTR3 |
Trans |
|
|
TCONS_00020748 |
processed_transcript |
novel protein coding |
ENST00000542698 |
592 |
307 |
UTR3 |
Trans |
|
|
TCONS_00028040 |
ankyrin repeat domain 16 |
novel protein coding |
ENST00000542698 |
667 |
310 |
UTR3 |
Trans |
|
|
TCONS_00028040 |
ankyrin repeat domain 16 |
novel protein coding |
ENST00000542698 |
628 |
308 |
UTR3 |
Trans |
|
|
TCONS_00028040 |
ankyrin repeat domain 16 |
novel protein coding |
ENST00000542698 |
682 |
289 |
UTR3 |
Trans |
|
|
TCONS_00030130 |
calcium/calmodulin-dependent protein kinase II gamma |
novel protein coding |
ENST00000542698 |
788 |
301 |
UTR3 |
Trans |
|
|
TCONS_00030132 |
calcium/calmodulin-dependent protein kinase II gamma |
novel protein coding |
ENST00000542698 |
695 |
315 |
CDS_UTR |
Trans |
|
|
TCONS_00030588 |
cytoplasmic polyadenylation element binding protein 3 |
novel protein coding |
ENST00000542698 |
754 |
301 |
UTR3 |
Trans |
|
|
TCONS_00034642 |
CD82 molecule |
novel protein coding |
ENST00000542698 |
691 |
305 |
UTR3 |
Trans |
|
|
TCONS_00034643 |
CD82 molecule |
novel protein coding |
ENST00000542698 |
691 |
305 |
UTR3 |
Trans |
|
|
TCONS_00037377 |
NAD synthetase 1 |
novel protein coding |
ENST00000542698 |
724 |
303 |
UTR5 |
Trans |
|
|
TCONS_00039782 |
GRAM domain containing 1B |
novel protein coding |
ENST00000542698 |
627 |
294 |
UTR5 |
Trans |
|
|
TCONS_00039782 |
GRAM domain containing 1B |
novel protein coding |
ENST00000542698 |
741 |
305 |
UTR5 |
Trans |
|
|
TCONS_00041296 |
RIC3 acetylcholine receptor chaperone |
novel protein coding |
ENST00000542698 |
734 |
313 |
UTR3 |
Trans |
|
|
TCONS_00041298 |
RIC3 acetylcholine receptor chaperone |
novel protein coding |
ENST00000542698 |
734 |
313 |
UTR3 |
Trans |
|
|
TCONS_00046540 |
sestrin 3 |
novel protein coding |
ENST00000542698 |
625 |
311 |
UTR5 |
Trans |
|
|
TCONS_00050195 |
FYVE, RhoGEF and PH domain containing 4 |
novel protein coding |
ENST00000542698 |
668 |
303 |
UTR5 |
Trans |
|
|
TCONS_00050741 |
spermatogenesis associated, serine-rich 2 |
novel protein coding |
ENST00000542698 |
665 |
299 |
UTR3 |
Trans |
|
|
TCONS_00050741 |
spermatogenesis associated, serine-rich 2 |
novel protein coding |
ENST00000542698 |
704 |
297 |
UTR3 |
Trans |
|
|
TCONS_00050741 |
spermatogenesis associated, serine-rich 2 |
novel protein coding |
ENST00000542698 |
762 |
301 |
UTR3 |
Trans |
|
|
TCONS_00067572 |
DCN1, defective in cullin neddylation 1, domain containing 2 |
novel protein coding |
ENST00000542698 |
719 |
304 |
UTR3 |
Trans |
|
|
TCONS_00075834 |
forkhead box N3 |
novel protein coding |
ENST00000542698 |
667 |
297 |
UTR3 |
Trans |
|
|
TCONS_00075835 |
forkhead box N3 |
novel protein coding |
ENST00000542698 |
667 |
297 |
UTR3 |
Trans |
|
|
TCONS_00075917 |
ribosomal protein S6 kinase, 90kDa, polypeptide 5 |
novel noncoding |
ENST00000542698 |
726 |
303 |
noncoding |
Trans |
|
|
TCONS_00076763 |
protein phosphatase 1, regulatory subunit 13B |
novel protein coding |
ENST00000542698 |
641 |
300 |
UTR3 |
Trans |
|
|
TCONS_00082423 |
transcribed_processed_pseudogene |
novel protein coding |
ENST00000542698 |
658 |
306 |
UTR3 |
Trans |
|
|
TCONS_00090929 |
nucleoporin 93kDa |
novel protein coding |
ENST00000542698 |
724 |
300 |
UTR3 |
Trans |
|
|
TCONS_00095053 |
epithelial membrane protein 2 |
novel protein coding |
ENST00000542698 |
523 |
296 |
UTR3 |
Trans |
|
|
TCONS_00101152 |
myosin phosphatase Rho interacting protein |
novel protein coding |
ENST00000542698 |
625 |
296 |
UTR5 |
Trans |
|
|
TCONS_00101169 |
myosin phosphatase Rho interacting protein |
novel protein coding |
ENST00000542698 |
625 |
296 |
UTR5 |
Trans |
|
|
TCONS_00108999 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000542698 |
714 |
301 |
UTR5 |
Trans |
|
|
TCONS_00109000 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000542698 |
714 |
301 |
UTR5 |
Trans |
|
|
TCONS_00109009 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000542698 |
714 |
301 |
UTR5 |
Trans |
|
|
TCONS_00109011 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000542698 |
714 |
301 |
UTR5 |
Trans |
|
|
TCONS_00109012 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000542698 |
714 |
301 |
UTR5 |
Trans |
|
|
TCONS_00109013 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000542698 |
714 |
301 |
UTR5 |
Trans |
|
|
TCONS_00109014 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000542698 |
714 |
301 |
UTR5 |
Trans |
|
|
TCONS_00116668 |
desmoglein 3 |
novel protein coding |
ENST00000542698 |
693 |
309 |
UTR3 |
Trans |
|
|
TCONS_00116668 |
desmoglein 3 |
novel protein coding |
ENST00000542698 |
694 |
301 |
UTR3 |
Trans |
|
|
TCONS_00118919 |
potassium channel tetramerization domain containing 1 |
novel protein coding |
ENST00000542698 |
726 |
296 |
UTR3 |
Trans |
|
|
TCONS_00119049 |
GRB2 associated, regulator of MAPK1 |
novel protein coding |
ENST00000542698 |
699 |
299 |
UTR3 |
Trans |
|
|
TCONS_00119477 |
zinc finger and BTB domain containing 7C |
novel protein coding |
ENST00000542698 |
637 |
313 |
UTR5 |
Trans |
|
|
TCONS_00123889 |
ribosomal protein SA pseudogene 58 |
novel protein coding |
ENST00000542698 |
658 |
307 |
UTR5 |
Trans |
|
|
TCONS_00123899 |
ribosomal protein SA pseudogene 58 |
novel protein coding |
ENST00000542698 |
658 |
307 |
UTR5 |
Trans |
|
|
TCONS_00133831 |
carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) |
novel protein coding |
ENST00000542698 |
707 |
305 |
UTR3 |
Trans |
|
|
TCONS_00135631 |
zinc finger protein 841 |
novel protein coding |
ENST00000542698 |
678 |
301 |
UTR3 |
Trans |
|
|
TCONS_00148048 |
potassium voltage-gated channel, subfamily G, member 3 |
novel protein coding |
ENST00000542698 |
717 |
308 |
UTR3 |
Trans |
|
|
TCONS_00148387 |
reticulon 4 |
novel protein coding |
ENST00000542698 |
517 |
288 |
UTR3 |
Trans |
|
|
TCONS_00148389 |
reticulon 4 |
novel protein coding |
ENST00000542698 |
517 |
288 |
UTR3 |
Trans |
|
|
TCONS_00149280 |
Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000416453} |
novel protein coding |
ENST00000542698 |
644 |
303 |
UTR3 |
Trans |
|
|
TCONS_00150599 |
four and a half LIM domains 2 |
novel protein coding |
ENST00000542698 |
679 |
293 |
UTR3 |
Trans |
|
|
TCONS_00150696 |
septin 10 |
novel protein coding |
ENST00000542698 |
717 |
302 |
UTR3 |
Trans |
|
|
TCONS_00165085 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
ENST00000542698 |
675 |
299 |
UTR3 |
Trans |
|
|
TCONS_00165085 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
ENST00000542698 |
749 |
306 |
UTR3 |
Trans |
|
|
TCONS_00165089 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
ENST00000542698 |
675 |
299 |
UTR3 |
Trans |
|
|
TCONS_00165089 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
ENST00000542698 |
749 |
306 |
UTR3 |
Trans |
|
|
TCONS_00165090 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
ENST00000542698 |
675 |
299 |
UTR3 |
Trans |
|
|
TCONS_00165090 |
SPECC1L-ADORA2A readthrough (NMD candidate) |
novel protein coding |
ENST00000542698 |
749 |
306 |
UTR3 |
Trans |
|
|
TCONS_00165341 |
TTC28 antisense RNA 1 |
novel protein coding |
ENST00000542698 |
695 |
309 |
UTR5 |
Trans |
|
|
TCONS_00166381 |
GRB2-related adaptor protein 2 |
novel protein coding |
ENST00000542698 |
600 |
302 |
UTR3 |
Trans |
|
|
TCONS_00182611 |
processed_transcript |
novel protein coding |
ENST00000542698 |
669 |
308 |
UTR3 |
Trans |
|
|
TCONS_00182613 |
processed_transcript |
novel protein coding |
ENST00000542698 |
669 |
308 |
UTR3 |
Trans |
|
|
TCONS_00182614 |
processed_transcript |
novel protein coding |
ENST00000542698 |
669 |
308 |
UTR3 |
Trans |
|
|
TCONS_00184373 |
neutral cholesterol ester hydrolase 1 |
novel protein coding |
ENST00000542698 |
690 |
288 |
UTR3 |
Trans |
|
|
TCONS_00185516 |
transcribed_unprocessed_pseudogene |
novel protein coding |
ENST00000542698 |
661 |
308 |
UTR5 |
Trans |
|
|
TCONS_00185519 |
transcribed_unprocessed_pseudogene |
novel protein coding |
ENST00000542698 |
661 |
308 |
UTR3 |
Trans |
|
|
TCONS_00186316 |
KIAA0232 |
novel protein coding |
ENST00000542698 |
635 |
298 |
UTR5 |
Trans |
|
|
TCONS_00186316 |
KIAA0232 |
novel protein coding |
ENST00000542698 |
654 |
302 |
UTR3 |
Trans |
|
|
TCONS_00190498 |
palladin, cytoskeletal associated protein |
novel protein coding |
ENST00000542698 |
667 |
290 |
UTR3 |
Trans |
|
|
TCONS_00190999 |
zinc finger protein 721 |
novel protein coding |
ENST00000542698 |
665 |
305 |
UTR5 |
Trans |
|
|
TCONS_00190999 |
zinc finger protein 721 |
novel protein coding |
ENST00000542698 |
689 |
298 |
UTR3 |
Trans |
|
|
TCONS_00193753 |
alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide |
novel protein coding |
ENST00000542698 |
659 |
298 |
UTR3 |
Trans |
|
|
TCONS_00194652 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000542698 |
649 |
299 |
UTR5 |
Trans |
|
|
TCONS_00194652 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000542698 |
723 |
303 |
UTR5 |
Trans |
|
|
TCONS_00194655 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000542698 |
649 |
299 |
UTR5 |
Trans |
|
|
TCONS_00194655 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000542698 |
723 |
303 |
UTR5 |
Trans |
|
|
TCONS_00194655 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000542698 |
646 |
288 |
UTR3 |
Trans |
|
|
TCONS_00194655 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000542698 |
658 |
325 |
UTR3 |
Trans |
|
|
TCONS_00194682 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000542698 |
607 |
306 |
UTR3 |
Trans |
|
|
TCONS_00194682 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000542698 |
795 |
314 |
UTR3 |
Trans |
|
|
TCONS_00194686 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000542698 |
670 |
289 |
UTR3 |
Trans |
|
|
TCONS_00194686 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000542698 |
607 |
306 |
UTR3 |
Trans |
|
|
TCONS_00194686 |
E74-like factor 2 (ets domain transcription factor) |
novel protein coding |
ENST00000542698 |
795 |
314 |
UTR3 |
Trans |
|
|
TCONS_00213181 |
tubby like protein 4 |
novel protein coding |
ENST00000542698 |
768 |
300 |
UTR3 |
Trans |
|
|
TCONS_00213191 |
tubby like protein 4 |
novel protein coding |
ENST00000542698 |
768 |
300 |
UTR3 |
Trans |
|
|
TCONS_00219453 |
WD repeat domain 27 |
novel protein coding |
ENST00000542698 |
627 |
305 |
UTR3 |
Trans |
|
|
TCONS_00222403 |
protein tyrosine phosphatase, non-receptor type 12 |
novel protein coding |
ENST00000542698 |
702 |
294 |
UTR5 |
Trans |
|
|
TCONS_00226753 |
cell division cycle associated 7-like |
novel protein coding |
ENST00000542698 |
644 |
303 |
UTR3 |
Trans |
|
|
TCONS_00226753 |
cell division cycle associated 7-like |
novel protein coding |
ENST00000542698 |
580 |
323 |
UTR3 |
Trans |
|
|
TCONS_00227594 |
GLI family zinc finger 3 |
novel protein coding |
ENST00000542698 |
544 |
211 |
UTR3 |
Trans |
|
|
TCONS_00235205 |
epithelial splicing regulatory protein 1 |
novel protein coding |
ENST00000542698 |
660 |
292 |
UTR3 |
Trans |
|
|
TCONS_00235219 |
epithelial splicing regulatory protein 1 |
novel protein coding |
ENST00000542698 |
660 |
292 |
UTR3 |
Trans |
|
|
TCONS_00235231 |
epithelial splicing regulatory protein 1 |
novel protein coding |
ENST00000542698 |
660 |
292 |
UTR3 |
Trans |
|
|
TCONS_00235906 |
zinc fingers and homeoboxes 2 |
novel protein coding |
ENST00000542698 |
604 |
307 |
UTR3 |
Trans |
|
|
TCONS_00239255 |
tumor protein D52 |
novel protein coding |
ENST00000542698 |
658 |
305 |
UTR3 |
Trans |
|
|
TCONS_00242952 |
ankyrin repeat domain 20 family, member A2 |
novel protein coding |
ENST00000542698 |
582 |
324 |
UTR3 |
Trans |
|
|
TCONS_00242953 |
ankyrin repeat domain 20 family, member A2 |
novel protein coding |
ENST00000542698 |
582 |
324 |
UTR3 |
Trans |
|
|
TCONS_00243068 |
lincRNA |
novel protein coding |
ENST00000542698 |
613 |
276 |
UTR3 |
Trans |
|
|
TCONS_00247576 |
contactin associated protein-like 3 |
novel protein coding |
ENST00000542698 |
630 |
295 |
UTR3 |
Trans |
|
|
TCONS_00247594 |
contactin associated protein-like 3 |
novel protein coding |
ENST00000542698 |
630 |
295 |
UTR3 |
Trans |
|
|
TCONS_00253752 |
queuine tRNA-ribosyltransferase 1 pseudogene 1 |
novel protein coding |
ENST00000542698 |
653 |
274 |
UTR3 |
Trans |