| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000323816 | growth arrest-specific 7 | protein coding | ENST00000547804 | 525 | 290 | UTR3 | Trans | |
| ENST00000378004 | Rho GTPase activating protein 26 | protein coding | ENST00000547804 | 552 | 296 | UTR3 | Trans | |
| ENST00000437099 | growth arrest-specific 7 | protein coding | ENST00000547804 | 525 | 290 | UTR3 | Trans | |
| ENST00000439138 | transmembrane protein 98 | protein coding | ENST00000547804 | 575 | 291 | UTR5 | Trans | |
| ENST00000478730 | ORAI calcium release-activated calcium modulator 2 | protein coding | ENST00000547804 | 538 | 310 | UTR3 | Trans | |
| ENST00000494969 | colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) | protein coding | ENST00000547804 | 507 | 270 | CDS_UTR | Trans | |
| ENST00000569832 | SSTR5 antisense RNA 1 | lincRNA | ENST00000547804 | 508 | 294 | noncoding | Trans | |
| TCONS_00009834 | SRY (sex determining region Y)-box 13 | novel protein coding | ENST00000547804 | 610 | 295 | UTR3 | Trans | |
| TCONS_00010077 | Ras association (RalGDS/AF-6) domain family member 5 | novel protein coding | ENST00000547804 | 510 | 293 | UTR3 | Trans | |
| TCONS_00030130 | calcium/calmodulin-dependent protein kinase II gamma | novel protein coding | ENST00000547804 | 612 | 294 | UTR3 | Trans | |
| TCONS_00057601 | transcribed_unprocessed_pseudogene | novel protein coding | ENST00000547804 | 576 | 291 | UTR3 | Trans | |
| TCONS_00085508 | neuregulin 4 | novel noncoding | ENST00000547804 | 615 | 312 | noncoding | Trans | |
| TCONS_00088780 | synaptotagmin XVII | novel protein coding | ENST00000547804 | 639 | 285 | UTR3 | Trans | |
| TCONS_00095053 | epithelial membrane protein 2 | novel protein coding | ENST00000547804 | 579 | 261 | UTR3 | Trans | |
| TCONS_00098643 | fatty acid 2-hydroxylase | novel protein coding | ENST00000547804 | 602 | 290 | UTR5 | Trans | |
| TCONS_00098644 | fatty acid 2-hydroxylase | novel protein coding | ENST00000547804 | 602 | 290 | UTR3 | Trans | |
| TCONS_00098645 | fatty acid 2-hydroxylase | novel protein coding | ENST00000547804 | 602 | 290 | UTR3 | Trans | |
| TCONS_00098647 | fatty acid 2-hydroxylase | novel protein coding | ENST00000547804 | 602 | 290 | UTR3 | Trans | |
| TCONS_00116668 | desmoglein 3 | novel protein coding | ENST00000547804 | 533 | 304 | UTR3 | Trans | |
| TCONS_00116668 | desmoglein 3 | novel protein coding | ENST00000547804 | 597 | 296 | UTR3 | Trans | |
| TCONS_00147093 | ATPase family, AAA domain containing 2B | novel protein coding | ENST00000547804 | 649 | 300 | UTR3 | Trans | |
| TCONS_00191796 | G protein-coupled receptor 125 | novel protein coding | ENST00000547804 | 604 | 295 | UTR5 | Trans | |
| TCONS_00191797 | G protein-coupled receptor 125 | novel protein coding | ENST00000547804 | 604 | 295 | UTR3 | Trans | |
| TCONS_00194655 | E74-like factor 2 (ets domain transcription factor) | novel protein coding | ENST00000547804 | 636 | 274 | UTR3 | Trans | |
| TCONS_00213181 | tubby like protein 4 | novel protein coding | ENST00000547804 | 591 | 302 | UTR3 | Trans | |
| TCONS_00213191 | tubby like protein 4 | novel protein coding | ENST00000547804 | 591 | 302 | UTR3 | Trans | |
| TCONS_00213738 | enoyl-CoA delta isomerase 2 | novel protein coding | ENST00000547804 | 542 | 297 | UTR3 | Trans | |
| TCONS_00240685 | metastasis suppressor 1 | novel protein coding | ENST00000547804 | 507 | 234 | UTR3 | Trans | |
| TCONS_00240688 | metastasis suppressor 1 | novel protein coding | ENST00000547804 | 601 | 274 | UTR3 | Trans |
>TCONS_00240688 (1644 nt)
GCCCTGCTGGCTGTCCCGCAGGACCCAGCGCCGCGGTAGCCTTCTCTGAACTGCGGCTCAGGCGGAGGTGTCACTCCTGCCTCCAGCCCAGGAGGGCAGG
TCAGGTTATGCAACGCGTGCCGCGCGATCTCCCCCCACCTCCAACCCCCTTTTCTCCCGGGTCCACACCGCAGTTCCCACCGCTCCGGGTGTCCTCCCCA
GTGCGCCGCGATTTTTGTGTCCAAGCCCCAGAGTCCCTCTGAGACCAACCCCCAGCCAGCACAGACTTCCTGCCTTCCCAGCTCGGGGATGTGGTCTCAT
TAGGTTGCCCAAGCTGGACTTGTACTCTTGGCCTCAAGAGGTCCTTCCATCTCAGTCTCCCAAGTAGCTGGGACTACAAGCATGCACCACTACACTCAGC
CAAATACTTTCAATAATTTGCCAGCTGACAACTTGATTGGGTTCTCCTTCAGGTTTGAAGCGCCCTCGAGAAGTGTCTAAAGGAGACAGTTGATAGCCAA
ACAACAGTTTTGGATTCACTGACTGATTATGAAAGAAGCAGTAGACTGGTATCAAGAATCAGTCAGCAAGGAGGCCCTCACCAGACGCCAGTGCCATGTT
CTTGGACTTCTCAGCCTCCATATTCATGAACTAAGTTTTTGGAATCCTTAGGCTTCCACGTGTGGAAAGCCTGAGCTAACCTACTGGAGGATGAGCCATC
ACCTGGAGCAGATTCAGGCCATCCTAGTTGAAGCCTCCCTAGGCCAAGCAACCGTCCAACTACCAGACATTGACCATTCAGCCTTGAACATTCAGCACAA
AGACAAAACAGACCAGACCAGAAGAGTCCCACAGAATAGGGGAAACTATTCAGAGAAAACTTAAGCCACTAAGTTTTATGGTGTTTTGTTCTGTAGCAGA
AGCATAGGCATACTGACAATACAAACCGAAATCCTTCTAACGTAGTGGACCTTTTCAGGCCAGCATTTTTTCCTTGAAAACCTGGAGCATGTATCCATCT
TATAGCAGAGATCACTTTCACAATGTTTGGGCTCTTGATTTGAATTGATGATGTAATGAGCCCTCTATCCAGATTGTAACTAATTACTCTGCGAATTGAC
TGGATTCCACACCCTTCTAATATTTTACTTTTCCTCTTTTATCAACTCTCATTCTTGCTGCCATGATCAATGGACCAACTATGCTTATAACCACAAATTT
TGATATGCTTAAACAAATGAACAAATATATTTAATAATTTCTTTTTTTTTTTTGAAATAGTATCTTGCTCTGTCACCCAGGCTGCAGTGCAGCAGCGTGA
TCTCAGCTCACTATAACCTCCACCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCACCACCATACCTGGCT
AATTTTTTGTATTTTTAGTAGAGACAGGGTTTATCCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAGTGATCCTCCTGCCTCGGCCTCCCAAAG
TGCTGGGATTACAGGTGTGAGCCACCATGCCCAGCCAATAATTTCCTGATATAATAAAAATGCCAATACTATACAATTAAATAGTAAAGTGATAAAAAAT
AGGATAACATGATAACCACTAATTAATATATACTACATAATCATC
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.