Detailed information on ENST00000548970

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00058750 lincRNA novel protein coding ENST00000548970 1304 443 UTR3 Cis

Sequence

>TCONS_00058750 (983 nt)
TTACTTGTTTCTGATTTCTCAACGCTCTTTTCTAGGCAAAAGTTGTCCAAACTATACAGACCCACAGAATCTAACAGATGTCTCTATATTCCTCCTCCTA
GAACCTCAGAGGATCCAGAACGGCAGCTGGTCCTTGCTGGACTGTTCCTGTCCATGTGCCTGGTCATGGTGCTGGGGAACCTGCTCATCATCCGGCCATG
AGCCCTGACTCCCACCTCCACACCTCCATGTACTTCTTCCTCTCCAACCTGTCCTTGCCTGACATCGGTTTCACCTCCACCACGGTCCCCCAGATGACTG
TGGACATCCAGTCTCGCAGCAGAGTCATCTCCTATGCAGGCTGCCTGACTCAGAAGTCTCTCTTTGCCATTTTTGGAGGCACGGAAGAGAGACATGCTCC
TGAGTGTGATGGCCTATGACCGGTTTGTAGCCATCTGTCACCCTCTATATCATTCAGCCATCATGAACCTGTGTTTCTGTGGCTTCCTAGTTTTGCTGTC
TTTTTTTTTTCTCAGTCTTTTAGACTCCCAGCTGTACAACTTGATTGCCTTACTAATGACCTGCTTCAAGGAGGTGGACATTCCTAATTTCTTCTGTGAC
CTTTCTCAACTCCCCCATCTTGCCGTTGTGACACCTTCATCAATAACATAATCATGTATTTCCCTACTGCCATATTTGGTTTTCTTCCCATCTCGGGGAC
CCTTTTCTCTTACTATAAAATTGTTTCCTCCATTCTGAGGGTTTCATCATCAGGTGGGAAGTATAAAGCCTTCTCCACCTGTGGGTCTCACCTGTCAGTT
GTTTGCTGATTTTATGGAAGAGGTGTTGGAGGGTACCTCAGTTCAGATGTGTCATCTTCCCCCAGAAAGGGTGCAGTGGCTGCAGTGATGTACACGGTGG
TCACCTCCATGCTCAACCCCTTTATCTACAGCCTGGGAAACAGGGATATTAAAAGTGTCTTGCGGCGGCCGCACGGCAGCACTG

Expression



Full and truncated open reading frames discovered in TCONS_00058750

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.