Detailed information on ENST00000551551

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000593250 centrosomal protein 76kDa nonsense mediated decay ENST00000551551 522 205 UTR3 Trans

Sequence

>ENST00000593250 (1255 nt)
AATCCCAGCACTTTGGGAGGCTGAAGTGGGCGGATCATTTGAGGTCAGGAGTTTGAGATCAGCCTGGCCAGCATGGCGAAACCCCATCTCTACTAAAAAT
ACAAAAATTAGCTGGGCGTGGTGGCACATGCCTGTAATCTCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAGT
GAGCCTGGGCAACAGAGTGAGTGAGACTTATATCTCAAAAAAAAACAAAAAACAAAAAACTGAAAGACATGAAGAAATGGTTTTTGTACCAAGGTTTGGC
CCACGCTGAGATTCACAAAGAACTGGCTTTCAGTTCTTATCTTTATTTTGATTTAAACTGGCCCATCATGTTGTCCTTTGAAGTTAGTCTAGTAAATTTC
TTTCCAAAGGGCTGGGGCACTCAGAAGGGAGTTTACTTTTCTATATTTATTTCATAAAGCAAAGATGGGAGATCCTCCATTAGGGCTTGGGAAAGTAAAC
TGAGTGGCAGAAGGGCTCCTGTGATTAGCTGAGAGAGACTGTGGTCCTTCGGCCCTGATGATAGATCCCTGGCCTTGCCACATACCATACACAGTGCCCG
CACCCCCATCCCCCACCACACCCAATATAGTCTGTGCCCTCAGGACATTGCTCCAGGGCAGTAGCATGGTGAGGTTAGCCTGATGATGGCCTTGAGCTAA
AGAGTGTGCACCTAAAATGCACTTGTTTGAGTAGTTTCTGCCTATGCCTTCAAGTTGCCTTTTTGGGAAAACCTAGTGACCGTTAAGAGTAAATGCAAAC
TAATTTGATTTTAATATCATATGTAGAGCTGTATTATATGAACCAAATGCTAGTCTGTTAAGCAATAGCTACACTTATTTTTTCAAGACAATGGATGGTT
TAAATGGAGTCATCTATAGAAATTGGTAGTGGCGTGAGTTATGCATTGTAACCATCAAGAAAGTTCAGTTGATGAAGTGTAGAGGAGCGATGGAGGTTGT
CAGACATCGGTTGTGTACATGCTCCTTTTTCTTTCACTTTAGTTTCCACGGGCTCCCTTGCTCAGCAGTATGCGCACCCTAACGCTACCCTGCACCCACA
TACTCCACACCCTCAGCCTTCAGCTACCCCCACTGGACAGCAGCAAAGCCAACATGGTGGAAGTCATCCTGCACCCAGTCCTGTTCAGCACCATCAGCAC
CAGGCCGCCCAGGCTCTCCATCTGGCCAGTCCACAGCAGCAGTCAGCCATTTACCA

Expression



Full and truncated open reading frames discovered in ENST00000593250

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.