Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
---|---|---|---|---|---|---|---|---|
ENST00000228741 | ELK3, ETS-domain protein (SRF accessory protein 2) | protein coding | ENST00000551844 | 1275 | 432 | CDS_UTR | Cis | |
ENST00000547860 | ELK3, ETS-domain protein (SRF accessory protein 2) | protein coding | ENST00000551844 | 1275 | 432 | CDS_UTR | Cis |
>ENST00000547860 (524 nt)
CCCTCAGTAATATCCAAAGGGCGTCCAGAGGGTGGGGAAAATCCCTACAGCACAGCTTTTCTCCAAAAAGAAGGTATGCACTGCCCCTATTTTATTTTCT
AACTTGATTCATAGCACGCTATTATTTTCTTTCATCAGTGAACTACGCAGAGGGGATTCCACCCTCCCCAAGACGGCCCCATGCAAGGTCAAGGGTTTAC
CTTGTCATAATAGTATCGCAGGGCTCTGCTCAGCTTATCATAGTTCATATTTGTTTTGTTTTTTCGGAGTCCCCACAGCTTGGCCACTTCTTCTGCTTTG
AGGAGCTTGAATTCACCATCGTTCGAGGTCCAGCAGATCAAATGCTCATGTTTCTGATCCAGCAGCAACTGCAACAGGAACTGCCACAGCGTGATTGCAC
TCTCCATACCTGCAGGGAGAGGAGGCCAGGTTTCCTGAGGCCTCCCCAGAAACCCAGCAGATGCCAGCATCATGCTTCCTGTACAGCCTGCAGAACTGTG
AGCCCATTAAACCGCTTTTCTTTAT
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.