Detailed information on ENST00000551844

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000228741 ELK3, ETS-domain protein (SRF accessory protein 2) protein coding ENST00000551844 1275 432 CDS_UTR Cis
ENST00000547860 ELK3, ETS-domain protein (SRF accessory protein 2) protein coding ENST00000551844 1275 432 CDS_UTR Cis

Sequence

>ENST00000547860 (524 nt)
CCCTCAGTAATATCCAAAGGGCGTCCAGAGGGTGGGGAAAATCCCTACAGCACAGCTTTTCTCCAAAAAGAAGGTATGCACTGCCCCTATTTTATTTTCT
AACTTGATTCATAGCACGCTATTATTTTCTTTCATCAGTGAACTACGCAGAGGGGATTCCACCCTCCCCAAGACGGCCCCATGCAAGGTCAAGGGTTTAC
CTTGTCATAATAGTATCGCAGGGCTCTGCTCAGCTTATCATAGTTCATATTTGTTTTGTTTTTTCGGAGTCCCCACAGCTTGGCCACTTCTTCTGCTTTG
AGGAGCTTGAATTCACCATCGTTCGAGGTCCAGCAGATCAAATGCTCATGTTTCTGATCCAGCAGCAACTGCAACAGGAACTGCCACAGCGTGATTGCAC
TCTCCATACCTGCAGGGAGAGGAGGCCAGGTTTCCTGAGGCCTCCCCAGAAACCCAGCAGATGCCAGCATCATGCTTCCTGTACAGCCTGCAGAACTGTG
AGCCCATTAAACCGCTTTTCTTTAT

Expression



Full and truncated open reading frames discovered in ENST00000547860

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.