| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000378004 | Rho GTPase activating protein 26 | protein coding | ENST00000553666 | 507 | 285 | UTR3 | Trans | |
| ENST00000389534 | zinc finger protein 841 | protein coding | ENST00000553666 | 575 | 268 | UTR3 | Trans | |
| ENST00000410023 | interleukin 1 receptor, type I | protein coding | ENST00000553666 | 525 | 289 | UTR3 | Trans | |
| ENST00000426391 | zinc finger protein 841 | protein coding | ENST00000553666 | 575 | 268 | UTR3 | Trans | |
| ENST00000513143 | podoplanin | protein coding | ENST00000553666 | 533 | 290 | UTR5 | Trans | |
| ENST00000513269 | NEDD4 binding protein 2 | protein coding | ENST00000553666 | 518 | 288 | UTR3 | Trans | |
| ENST00000560870 | sense_intronic | sense intronic | ENST00000553666 | 502 | 269 | noncoding | Trans | |
| ENST00000594295 | zinc finger protein 841 | protein coding | ENST00000553666 | 575 | 268 | UTR3 | Trans | |
| TCONS_00028040 | ankyrin repeat domain 16 | novel protein coding | ENST00000553666 | 646 | 286 | UTR3 | Trans | |
| TCONS_00090929 | nucleoporin 93kDa | novel protein coding | ENST00000553666 | 546 | 297 | UTR3 | Trans | |
| TCONS_00090939 | nucleoporin 93kDa | novel protein coding | ENST00000553666 | 546 | 297 | UTR3 | Trans | |
| TCONS_00090941 | nucleoporin 93kDa | novel protein coding | ENST00000553666 | 546 | 297 | UTR3 | Trans | |
| TCONS_00135644 | zinc finger protein 841 | novel protein coding | ENST00000553666 | 575 | 268 | UTR3 | Trans | |
| TCONS_00194686 | E74-like factor 2 (ets domain transcription factor) | novel protein coding | ENST00000553666 | 616 | 297 | UTR5 | Trans | |
| TCONS_00195633 | aspartylglucosaminidase | novel protein coding | ENST00000553666 | 526 | 285 | UTR3 | Trans | |
| TCONS_00202516 | family with sequence similarity 173, member B | novel protein coding | ENST00000553666 | 617 | 289 | UTR3 | Trans | |
| TCONS_00222403 | protein tyrosine phosphatase, non-receptor type 12 | novel protein coding | ENST00000553666 | 606 | 289 | UTR5 | Trans | |
| TCONS_00240688 | metastasis suppressor 1 | novel protein coding | ENST00000553666 | 611 | 288 | UTR5 | Trans |
>TCONS_00240688 (1332 nt)
TGCTGGGATTACAGGCGTGAGCCACTACACCCGGCCCCTTTACCTTTTTTAGAGTAATTTATATTCATATCTACAGTGACATTATTGAATATAGTTTTCT
TTTTTCTCTCATATCTTTTAATTTCCTTTCTAAATTTAGTTTTCAGTAATTACAGCTTTACCTAAAGAATTCCATTTCTGGCAAAATTGTATTAAATTTG
TTTTTGCATTGTGAGAGGTTCTAAATATGTTTTACACAAGTAAAAGTCCTAAATGAGAGCCAGGTGCAGTGGTGTATGCCTGTAGTCCCAGCTACTTGGG
AGGCTGAGGCAGGAGGAATGCTTGAGCCCGGGAGTTGAGAGCTGTAGTGCCTGTGAATAGCCACTGCCCTCCAGCCTGGGCAACATAGCAAGACCTTGTC
TCTTTTACAAAAAAAAGTTCCAAAACAACATGAGGAGGGTGCAAACAATCAGCTGTTGCAGGTAGAATTTTTTTACATACCATCTCTGTTTCTCTGCTCT
GTATCGTATCACATCACTATTGAAGCTAGTAGTAAAATGTAATAAATAGACCCAGTGTGGTGTAATTTTATATTAATCATTGTCCCGTATGTAATCTTCA
TCAATTAGATTTTAAAGTATTATACTACATTCTGATGCCAGGCAAACAAAGAGGCGTATTAGGCTTTTAACATCTATTACATCTATGTCTATCATCTTCT
TGTTTCAGATGCAATTTATTTATTTTATTGAGATGGAGTCTTGCTCTGTCGCCCAGGCTGAAGTACAGTGGCACGATCTTGGCTCACTGCAACCTCCGCC
TCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCTCCAGTAGCTGGGATAACAGACGCGCACCACCACACCCGGCTAATTTTTGTGCTTTTAGTAGAAAT
GGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTAATCTCAAGTGATCTGCCCACCTCAGCATCCCAAAGTGCTAGGATTACAGGCATGAACCAC
CGCACCTGGCCCAGATGCAATTTAAAAGCTATTTCAAAAAAAAAACAAAGCAGTTGTATTTCTGATAATTTTTTTTTCTTTTAGCTATCATGGTGAACTT
ACTTCAGATTGTGCGGGACCACTGGGTTCATGTTCTTGTCCCTATGGGATTTGTCATTGGATGTTATTTAGACAGAAAGAGTGATGAACGGCTAACTGCC
TTCCGGAACAAGAGTATGTTATTTAAAAGGGAATTGCAACCCAGTGAAGAAGTTACCTGGAAGTAAAGACTGGCTAGATTATCGAATGTTCACATTTTAA
AGTTCTGAGAGAAATAAAAACATGAAGAATCTG
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.