Detailed information on ENST00000555972

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000563329 HEAT repeat containing 4 protein coding ENST00000555972 1018 345 UTR5 Cis

Sequence

>ENST00000563329 (518 nt)
CTGTACTGGCTATAAGGAATGCTGGGCAGGCCTCGCTGCCACACCACCTCCTGAGAGAAGAGACAGGGTCTTACTATGTTGTCCAGGCTGGTTTCAAACT
CCTGGAATCAAGCGATCTTCCTGCCTTGGCCTCCAGAAATGCTGGGACTGCGCCTGGAATAGATACGGGTAAAGAACCTTTTACATCAGACTCTTGTGTC
CTACTCCCAGAATGCTGATTCAGTAGCCTGCAAGTGAGGCCTAGAAATCTGCATTTTCACAAGCTCTCAGGTTTAATACACAATACATTTAAAGAAAGCA
CAGCCCAAAGGGTGTCAGTGGGGTGTATGAAGGAAGCCTGGTTAGTGGGGAGAGTGGGATTAGGGAACAGCTGCTTAACCTGGCTTGTTTCAAGTCCCCC
TTTCTCCCTTTTTGCCCTCAAAAAGTTCCCCTCATTTTTTCCCCTCTACTTTCTAATTTCTCACCATGCACTCACACAGCTATACAGCTGTCTCCAGAGA
TTACTCTGGAAACTCTGCT

Expression



Full and truncated open reading frames discovered in ENST00000563329

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.