Detailed information on ENST00000556002

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00135884 zinc finger protein 347 novel protein coding ENST00000556002 503 267 UTR5 Trans

Sequence

>TCONS_00135884 (1038 nt)
TGGCCGTAGCTCCATCGCATTTTATGTTTCTGGCGAGAAGGGAACGGAGTTTTCATCAGGTAGATTGGTTTTTGTGCGGCCGTCCTCCACCGTTTCCTCC
AGGACAGCACCTAGTCGTGGCCGGAGGAGTCTCAGAGCTGTCAGAAAGAATAAGACTGATTTTATGGGAAAATTAAGCAGATGCTCCAGTTTGAGAAACC
TGGATCTGCGATCTGTTTGTGGTACCAGCATCAAGATGATTTATGGTAATAAGATATAAAACCAAGGAAAATAACCTAAAGTCTGAAAAAGACCAGAATC
GAAGTTTCCTGATTCATATTTTAATGTTTTGAAATTTATACTCCAGGCTGGGTGCAGTGGCTTGTGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGG
CCGGATTGCCTGAAGTCAGAAGTTCGAGACCAGCCTGACCAACATGGTGAAACCCTGTCTCTACTTAAAAATACAAAAGAGCTGGGCATGGAGGTGGTGC
GCGCCTGTAACCCTAGCTACTCGGGAGGCTGAGGCCTAAGAATCTCTTGAACCCAGGAGGCAGAGGTTGTAGTGAGCCGGGATCACGCCACTGCACTCTA
GCCTGGGCGACAGAGAGAGAGACTGTCTAAAAAAGGAAAAGAAAAAAATTTATACGCCAAAAAAGATATTCTGAGATAACCTGTAGTTACCACTAACTTT
GTGACAAAATTATAAAAATCCACAGCCATCTATGAATCTGTAGGCAGACCTGAAGTTTGAACGACTGGTGAAGACATCTGATTTTCTTTATAGCCAAGTT
AGGATAACAAAATGCAAACAAGTCATTAATATTTACTATATGCAAGATACAGAAAGATGAAGGAAGGAGTAAGAAGTTATCCTTCGTGGAACTATTCAAA
GCAAAAATGCAAAATACCAGGGAAAGCTTTGAAGAACCAAGATTTGAGCAGGTTCTTAGAATATAGATTGGATTGGATTTGATTTCAAGAAAGATGAACG
TGTAAAGCAGAAGTGGGAAGCCAAAAACTTTTTTCCAAA

Expression



Full and truncated open reading frames discovered in TCONS_00135884

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.