| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000524264 | SAP30L antisense RNA 1 (head to head) | antisense | ENST00000556637 | 604 | 244 | noncoding | Trans | |
| ENST00000556539 | signal transducer and activator of transcription 2, 113kDa | processed transcript | ENST00000556637 | 619 | 244 | noncoding | Trans | |
| TCONS_00059486 | signal transducer and activator of transcription 2, 113kDa | novel protein coding | ENST00000556637 | 619 | 244 | UTR3 | Trans | |
| TCONS_00059487 | signal transducer and activator of transcription 2, 113kDa | novel protein coding | ENST00000556637 | 619 | 244 | UTR3 | Trans | |
| TCONS_00059488 | signal transducer and activator of transcription 2, 113kDa | novel protein coding | ENST00000556637 | 619 | 244 | UTR3 | Trans | |
| TCONS_00059489 | signal transducer and activator of transcription 2, 113kDa | novel protein coding | ENST00000556637 | 619 | 244 | UTR3 | Trans | |
| TCONS_00059491 | signal transducer and activator of transcription 2, 113kDa | novel protein coding | ENST00000556637 | 619 | 244 | UTR3 | Trans | |
| TCONS_00059493 | signal transducer and activator of transcription 2, 113kDa | novel protein coding | ENST00000556637 | 619 | 244 | UTR3 | Trans | |
| TCONS_00059495 | signal transducer and activator of transcription 2, 113kDa | novel protein coding | ENST00000556637 | 619 | 244 | UTR3 | Trans | |
| TCONS_00059497 | signal transducer and activator of transcription 2, 113kDa | novel protein coding | ENST00000556637 | 619 | 244 | UTR3 | Trans | |
| TCONS_00107851 | transient receptor potential cation channel, subfamily V, member 1 | novel protein coding | ENST00000556637 | 607 | 244 | UTR5 | Trans | |
| TCONS_00107864 | transient receptor potential cation channel, subfamily V, member 1 | novel protein coding | ENST00000556637 | 607 | 244 | UTR3 | Trans | |
| TCONS_00119961 | ring finger protein 152 | novel protein coding | ENST00000556637 | 620 | 246 | UTR5 | Trans | |
| TCONS_00135884 | zinc finger protein 347 | novel protein coding | ENST00000556637 | 589 | 240 | UTR5 | Trans | |
| TCONS_00194682 | E74-like factor 2 (ets domain transcription factor) | novel protein coding | ENST00000556637 | 606 | 245 | UTR3 | Trans |
>TCONS_00194682 (923 nt)
GATGAGGAGTGTGAAGCATGTCCACTCAATGTAAATGGTGAGACAACAGAAATCATTAAAATGTATTGAAAATATGAATACCATTTAAAAAACGAACAAT
TCAAGTGTAATCTTTGACTACGGATGACATAAGCAGTATAGTGAAGTTTCTTATTTTGCATCAGAACAAGTGTGCTGTTGTTCATTTTTTTAAAAGAAAA
TTGATAAGTATTACCACAATTAATAGATACCTGAATGACTAAGAGAAGGGTCAAATGAATGAATCCGTGAAAAATATTTCAATCCTGTTACCTTCTCTGC
TTTGCACTTCCCAGAATGGACACACCTGGGCTGGCAGAACATCTTGCCTTGATCTGGAGCCCCATGTCTGCCCCTCTGTAGAGGTGCACATGGGCCAATG
ATGGATGCAATGAGCTGATCATTTTGCTGTGATCAAGGCTATGTTGCCTCTGTGTTAGGCCAATGGTTGATGTTCATGGGTGATTGATCATCCTGTAGCG
ACGGTGGTATTGACTGTTCCCCAGAGGACAAGGAGTGTGTTCTTATAATGGACATCATGATTGGGATTGTCTTTATTAAACTTTGTCAGGAGAGTAAAGA
TCAATGTGGCCACATGTTGTGGCTCATGCCTGTAATCCCAACACTGTAATCCCAGCACTGTAATCCCAGCCTGTAATCCCAGGCTGAGGTGGGCGGATCA
CCTGAGGTTGGGAGTTCGAGACCAGCCTGACCAACATGGAGAAACCCCGTCTCTACTAAAAATACAAAATTAGCCGGGCATGGTGGCGCATGTCTTTAAT
TCCAGCTACTCAGGAGGCTGAGGCAGGAGAAACGCTTGAACCCGAGAGGCGGAGGTTGCAGTGAGCTGAGATTGCGCCATTGCACTCCAGCCTGGGCAAC
AAGAGTGAAACTCCATCTCAAAAG
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.