| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000378004 | Rho GTPase activating protein 26 | protein coding | ENST00000556725 | 526 | 281 | UTR3 | Trans | |
| ENST00000439138 | transmembrane protein 98 | protein coding | ENST00000556725 | 501 | 284 | UTR5 | Trans | |
| ENST00000482603 | glyoxylate reductase/hydroxypyruvate reductase | processed transcript | ENST00000556725 | 547 | 279 | noncoding | Trans | |
| TCONS_00116668 | desmoglein 3 | novel protein coding | ENST00000556725 | 551 | 282 | UTR3 | Trans |
>TCONS_00116668 (671 nt)
AAACTTCTGAATGTTTGTAACCACAGATTGATGATTTGGTTACAAAGACTCTCTGTTGGTGATGGTTTCTGAGAACTGGAAGATGGAGTCTAGCTCTGTT
GCCCAGGCTGGAGTATAATGGCACGATCTCGGCTCACTGTAACCTCCGCCTCCCGGGTTCAAGCGATTCTTTTGCCTCAGCCTCCCAAGTAGCTGGGAGT
ACAGGCGCCCAACACCACGCCTAGCCAATTTTTGTATTATAGAGATGGGGTTTCACTGTGTTAACCAGAATGGTCTTGATCTCCTGACCTCGTGATCCAC
CTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCACCCGGCCAAGTACTTACCTTTGTAAGAAATCATAAGATTCTCATTTTTTTCT
CCATTAACTACATAAAGCAGGACAATGGTTGGCACCATTGCTTCCTCACTGAACTGTGGATGGGTCTCAGCATGCAAAGGAAGTAGAAAGTGAATGGGAG
GACGGCGGCTGTTGCTCAGAAGTTCCTTCCATAATTTGATTTATTAACACTATTTGGGTTGTTCATGGCTTGGTTTTCCCTCCCTTTTTCCTCCAGTGAA
CGGTGACTTGACAGAGGTACATAGGAGGCTACTTGTTCTCTTGTTGGCTGCTTGTATTTGCTTTCTGGAAGG
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.