Detailed information on ENST00000556942

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00075840 forkhead box N3 novel protein coding ENST00000556942 570 192 UTR3 Trans
TCONS_00075841 forkhead box N3 novel protein coding ENST00000556942 570 192 UTR3 Trans

Sequence

>TCONS_00075841 (497 nt)
AGACCGGCCAGATGAGGGGATGATGGAGTTGCCTGCTTGACTCGTTCCTGTACTTTTATCCCAACAAAACATGACACACACCGAGATGTGAAAGCTGTCG
ACTTTTCTTTGTAAATGTTTCTACCCAGGAAGACATGATTTCACCCACCATGAAGCCTTCTGGAAGCACATTCCTCTGACGCTGCAGCAGCGAAGGAAAG
ATGGAAAAGAGAAGTTATCATTTCTTTCTCAAGATCCTGGCCCCATGAGCCTCAGTGTAGCCCTAGTTCCTGGGATCAGCACCAACAGGCAGGGAGGAGA
GGCTCTGGCGCCCTGCAGACAGCACCAGGTTCTTGGCATCAGGAGCTGGATACAGAGTCCCTGATAATCCCAGCCACAGAATATTTCAAACTCACCGACA
TGTCCTCTAAATATCAGATATGAAAAGGCTTCCACTCTTGCACCTGTCTTGCTATTATTTTACAGATGTGTTCTAAAAGCTATAAAGACGGAAATCAC

Expression



Full and truncated open reading frames discovered in TCONS_00075841

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.