Detailed information on ENST00000558611

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000450928 antisense antisense ENST00000558611 500 305 noncoding Trans

Sequence

>ENST00000450928 (686 nt)
GATCAATGCAGGGCATGAAGAAGATGAACTCAAACCATTTGTTGAACCAGAGCTAGACATCTCAGACCAAAAAAGAATAGATATTATGGTGGGAATGGGA
TATTCACAAGAAGAAATTCAAGAATCTCTTAGTAAGATGAAATACGATGAAATCACAGCTACATATTTGTTATTGGGGAGAAAATCTTCAGAGGTAAGAG
TAATCAGAAAGAGCTGAAATACCCTGTATGTAATTATTAGTTTATATAAACTGTTTTCTTAGTTTTTATCTTTTGAATATTTGTAACATTTGATACATCA
TTTTTTAGATTTACTTGCAAATAGCAAATCTAAATCCTATGACTATTATAAGCTATTTTAACTTAACCCTTAATGATGGATATTGGCCAGGCGTGGTGGC
TCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGACAGATCACTTGAGACCAGGAGTTCGAGACCAGACTGGCCAACATAGGGAAACTCTGTCTC
TGCTAAAACAAACAAACAAACAAAAAATTAGCTGGGCGTGTTGGCGCTTGCCTGTAATCCCTGCTCCTTGGGAGGCTGAGGCAAGAGAACTGCTTGACCC
TGAGAGGCAGAGGTTGCGGTGAGCCAGGATCACGCCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTCTGTCTCAAAAAAAAAAA

Expression



Full and truncated open reading frames discovered in ENST00000450928

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

Best hit to NONCODE v4:
NONHSAT081791 (Evalue: 0)