| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000263955 | serine/threonine kinase 17b | protein coding | ENST00000561287 | 559 | 288 | UTR3 | Trans | |
| ENST00000521027 | pleckstrin and Sec7 domain containing 3 | protein coding | ENST00000561287 | 508 | 268 | CDS_UTR | Trans | |
| ENST00000568559 | transmembrane protein 170A | nonsense mediated decay | ENST00000561287 | 531 | 267 | UTR3 | Trans | |
| TCONS_00032151 | long intergenic non-protein coding RNA 959 | novel protein coding | ENST00000561287 | 528 | 273 | UTR5 | Trans | |
| TCONS_00119961 | ring finger protein 152 | novel protein coding | ENST00000561287 | 610 | 269 | UTR5 | Trans | |
| TCONS_00147100 | ATPase family, AAA domain containing 2B | novel protein coding | ENST00000561287 | 602 | 269 | UTR3 | Trans | |
| TCONS_00153158 | serine/threonine kinase 17b | novel protein coding | ENST00000561287 | 559 | 288 | UTR3 | Trans |
>TCONS_00153158 (599 nt)
TGAGTGATCCCCATGCGTTTTCTGCTGCAGAGCAGGACATGCTGAAGTGATTCCTTCGTGAGCAGATGTTAGAGGTCTCCCTTTGACAGCTTGTTACAAA
GTTGATCACGAATATACTATTACGTGTGTTATGGTCCTCATTATTTGGATGAATAATTTGAATAATAAGTCAGCTTGTGACTTAGCCAAATAAATCTTCT
GATTCCTAGTAAAGTGTTTTTCATTATACGAAATGCCAGCTATGTAAGAGGAGATTAAAAGTACTAAGAACTGTAAGTACTCCATTGATTATCATATGCT
AACCATGGGCCAGGCACGGTGGCACACACCTATAATCCCAGCACTTTGGGAGGCTGAGGCGGGTGGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGG
CCAAGATGGTGAAACCCCTGTCTCTACCAAAAATACAAAAAATTTGCCAGATGTGGTGGTGCATACTGGTAATCCCAGCTACTCAGGAGGCTGAGTCAGG
AGAATCGCTTGAACTCGGGAGGCAGAGGTTGCAGTGAGCTGAGATCGTGCCACTGCGCTCCAGCCTGGGTGACAAAGATAAACTCCATCTGAACAAAAAA
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.