Detailed information on ENST00000565189

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00148720 WD repeat containing planar cell polarity effector novel noncoding ENST00000565189 894 565 noncoding Trans

Sequence

>TCONS_00148720 (720 nt)
GTGGATTAAAATGTTCACTTTATTCCTGAAACCCAGGCTGGCTGCTCTAAGTTGATCTGGTGCCTTGGTCACTCGTGGCTTCTTTCTTCTATGCCAGCTC
TGTCTTCTCTACACTTCCTCTGGAGGAGTAGGCCTTGACACAATTACAAGAAGTCAGGGACCCTGAACAGAGGGACCAGCTGAAGTCACAGCAGAAGAAC
ATAAATTGTGAAGATTTCATGGACATTTATTAGTTCCCCAAATTAATACTTTTATAATTTCTTATGCCTGTCTTTACTGCAATCTCTGAACATAAATTGT
GAAGATTTCATGGACATTTATCACTTCCCCAATCAATACTCTTATAATTTCCTATGCCTGTCTTTAATCTCTTAATCCCATCATCTTCCTAAACTGAGGA
TGTATGTCGCCTCAGGACCCTGTGATGATTGCATTATCTGCACAAGTTGTTTGTAAAGCGTGTGTGTTTGAACAATATGAAATCTGGGCACCTTGAAAGG
AACAGGATAACAGTGATTTTCAGAGAACAAGGGAGATAACCATAAGGTCTGACTGCCTGCAGGACCGGGCAGAACAGAGTCGTATTTCTCTTCTTACAGA
AAGCGAATAGGAGAAATATTGCGAATTCTTTTCTCAGCAAGGAATAGCCCTGGGAAAGGAAAGCATTCCCAGGGGGAGGTCTCTAAAATGGCTGCTCTGG
GAGTGTCTGTCTTATGTGGTT

Expression



Full and truncated open reading frames discovered in TCONS_00148720

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.