Detailed information on ENST00000571678

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00080691 ankyrin repeat domain 34C novel protein coding ENST00000571678 504 380 UTR5 Trans
TCONS_00080692 ankyrin repeat domain 34C novel protein coding ENST00000571678 504 380 UTR5 Trans

Sequence

>TCONS_00080692 (2485 nt)
AAAGAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAAGGGGAAGGGGAAGGGGAAGGGAAGCCACGCTCATTCACTTAGGTATTCGCTGTGGCTA
CTTCCTACAAGAACTGATTTGAGTATCTGTGAGAGCAACAATGTGGTTCCCAAGCCTAAAGTATTTACTGTCTGGCCCTTTACAGGTAGAGTTTTCTGAC
ACCAAGCAGAGTACAAAAATTCAATTTAATAAATAAATTTAAGAGGCAGAGAGAGATTTTAGTGACAATTAGAGCGAAGTGTGTTTTGTAATGATGGAAC
TGCTTTTGAACCCTGGTTACATTTTTAAAAGGTCAGGCCAGGCAGCACAGACACAATCCCCAGTGTTGCTGATGTCTGTGAGTGATCACTTTGGTGACAG
TGAGGCATCAACAATCAGTTTGGCAATAGCAACATTATTTATTCTATATCTTCTTTTTCCTTCAAAGTGTTTTTTCTACATTATGAAAAACAATGGGAGG
GAAGGCCAGTGTGACTATTAATAAGACTTGCACTAAGCATTTTGCATCTTGTCAAGCAGACCATATTTTTAGTGCATCTACTTTTTGATAAATACATTAC
ATGGCCTGGACCAAAACCTTAAAAAAAAAAAAAAAGGGCAAGTTGCATTACATGTTTTTTTTCCTTTTTGTATTATGAGAGATTAGGAAGCCAGTTTTAA
TAAGGGATTTTTAGCAGTTTTAATAAGGAATTTTTCAAAATACTTAGCCTTATTTTTAAATTGTAAGTTAATTCCTTCATGTTTCTATGCTTAGTCAATA
ACAAATACACAAGAAAAAAGCCTCATAAACCATCATAACTGCATTGTAAGGAATATTCATACTGTAAGGGTGTATTAATTCCATTTCACGCTGCTGTGAA
GAAATACCTGAGACTGGGTAATTTATAAAGGAAAGAGATTTAATTGACTCACAGTTCCACAGGGCTGAGGGGGCCTCAGGAAACTTACAATCATGGCAGA
AGGGGAAGTAAATATGTCCTTCTTCACATGGTGGCAGGAAGGAGAAGTGCTGAACAAAAGGAGGAAAGCCCCTTGTAGAAGCATCAGATCTTGTGAGAAC
TCACTCACTATCACGAGAACAGTATGGAGGTCACCGCCCCCATGATTCAATTACCTCCTACCAGGTTCCTCCTTGCTAGGATTATGAGGACTATGGGAAC
TACCATTCAAGATGAGATTTGGGTGAGGACACAGCCAAACCATATCAAAAGGCAGTTGCCTAAGATGATGTGAAATCACCAGTGATTAAGACTTGATCCA
TCTTCAATTTTCAAAGCAGAAACCAGAAATCATTTTCCATTGAGCCACTCTGACTTTTCAAAAGACATTTGTCAGAAATCCAGTTTGCCCTGCTAACTCC
CAAGTAGAAAAATCTAAGTTTAGGTCATGTAAGGATGTTTATACATTTGTACAATTGGAGGAATTAATAAAAAATCTAATTCCATTTTGATTAGATCAGT
TCTCTGGGTGAGTGGAGATAGCTGTTCCAAGTCCATGGATCCGATTATGCTCCTGAAGGGATTAAAATCTTAGATACAGGAGAGATAAAGAGAGGGTTGC
TAAAAGTGTGCAAAATTAAAGTTTGGAATCCTATCCGAGAACCCAAGTATGAATAATATTCTAGCACTCTACTAAAGGAAACAAACTTCTGTGCATTCTT
TTGTCTCTAAAGATAGAAAGTATTTCTGAATTTGAAAGTAATCCAGCTTTTGGTATTCTTATAAAAACATTACAAAAATGATAGTAACAACTAACTGCAT
TTTTGTGGATCTGCTCATTTCAGACGAAAGTAGGCGGTACGAACCCTAATGGAGGCAGTTTTGAGGAGGTCCTCAGCTCCACGGCCCATGCCAGTGCCCA
GAGCTTGGCAGGAGGCTCCCGGCGGACCAAGGAGGAGGAGCTGCAGTGCTAAGTCCAGCCAGCGTGCAGCTGCATCCAGAAACCGGCCACTACCCAGCCC
ATCTCTGCCTGTGCTTATCCAGATAAGAAGACCAAAATCCCGCTGGGAAAAACCCAGGCCTTGACATTGTTATTCAAATGGCCCCTCCAGAAAGTTTAAT
GATTTCCATTTGTATTTGTGTTGATGATGGACCACTTGACCATCACATTTCAGTATTCATAGATGACTGTCACATTTTAAAATGTTCCCACTTGAGCAGG
TACACAACTGGTCATAATTCCTGTCTGTGTAATTCGATGTATATTTTTCCAAACATGTAGCTATTGTTTGCTTTGATTTTTGCTTGGCCTCCTTTATGAT
GTGCATGTCCTTGAAGGCTGAATGAACAGTCCCTTTCAGTTCAGCAGATCAACAGGATGGAGCTCTTCATGACTGTCTCCAGCAATAGGATGATTTACTA
TAAATTTCATCCAACTACTTGTGATCTCTCTCACCTACATCAATTATGTATGTTAATTTCAGCAATTAAAAGAATTGATTTTAATG

Expression



Full and truncated open reading frames discovered in TCONS_00080692

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.