Detailed information on ENST00000575159

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00024563 long intergenic non-protein coding RNA 839 novel protein coding ENST00000575159 771 592 UTR3 Trans

Sequence

>TCONS_00024563 (1351 nt)
GATTTATTATGGTAAATATTAAGAGCAGAAAGCATGTGTAACTGTGTCACACAGTGATTACATCCAGGCATTATTGCCAGCCAAGATTGATAAATATGCC
CAATAAGTATAACTGTTCTCTGTGTTGTTCCTTGTTGAAGGAATACTCATGGCAATGGTGATCACCACTATCATATCTATCATTAAATTACTCATTGTGA
CTGGTTGTCCCACTTTCCTCAGGTTTTCTTCCACCATCTGTGACAGCTTCTTGATCTGTCCCCAGGTAGGTGGCTGTGTTCGACAGCTGTTGCTCATGAT
AGTTGGGGTCCTCCTCAGCATCAGTCTTGACATGGCTGCAACCAGGGGATCCTCGGGATCCTCCTGGAATCTCTTCCTCAGCATCTGGCTCGTGGCAAGG
TTTCAGGTGTCTTGATGGCACCCAAATTGGCTATTGATTCGGTCCTGGAGAAACACAAGCATAACCTCTACCCCAAGTTATTATTTTACCTATTTCCCAA
CTTTTTGTTATTGTATCTCTCCACCAAACCAGTTGTTCTGCTTCTGTCTTTGCAGCTGGTTTCTGTAGATGCTGTTCAGCTGCTGGCCTTTAAGCAGGCT
CAAAAAATTTAAAGTCAATAATGCTAGAATCAATTGCATATGGGGTGTCCCGTAGTCCCTGCTTCTCCCCTTTTGCTTTTGCAACTGCTGTTTCAGGGAG
AGATTCATTCTTTCTACTATGGCTTGTCCTTGAGAATTATATGGGATGCCAGTAATGTGTTTAATATTCCATATAGAGAAAAATGTAGCTAGAGCTTGGC
TAGTACAGCCTGGGGCATTATCTGTTTTAATAGAAGCTGGAATGCCCATCACCGCAAAACACTGCAAAAGGTGACGTTTAACACAGGCAGAAGACTCTCC
TGATTGGCATGTAGCCCAGACAAAGTGAGAAAAGGTGTCCACACATACATGTACATAAGCTAGTCTCCCAAACGAGGGAACATGTGTGACATCCATTTGC
CAAAGAGAATTAGGTTCCAATCCTTGAGGATTAACTCCTCCTGTAAAAGATGAGGAATGCACCATTTGGCAAGTTGGGCATCGCTGGATAATAGCTTTAG
CTTCTTTCCAGGTAATGCCGTATCTGTGTTTGAGACCAGAGGCATTAACATAGGTTAAATTGTGAAAGTGTCTAGCGTTAGATATTGCATTAGCAACTAG
GTGATCAGCCATTTGATTCCCTTCAGTTAAAGGTCCTGGAAGAGGTGTATGAGCCCTAATGTGAGTGATGTAAAAAGGATGCATTCTACTCCTGACTGCT
GTTTGCAATTGGGTAAATAAAGCCATCAGTTGCTCATCTGTGTGGAATCGTA

Expression



Full and truncated open reading frames discovered in TCONS_00024563

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.