Detailed information on ENST00000578539

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00195633 aspartylglucosaminidase novel protein coding ENST00000578539 507 261 UTR3 Trans

Sequence

>TCONS_00195633 (2789 nt)
TGTTTAGTGCTAAGGTTGATACTAAGCAGAATTAAAGATGTGAAATTTAATAAATACCCTGTTTTAAGAGCTTTGCTAAAGATGTGTATGGAATGTTCTG
AATGAAACAGACTTAGTAAGACATGAGTGTTGAAAAGTTTTCTCAGTTAATTTAGCAGCACTCAGGACTGCTTTGTCCATGCAGATACGGCTGACTTACT
GGGGACTTTTGTTTCTAACATTAGCCAAGCTTACTGTCAACTCTGAAGAGATGTTGGAGTTGTCCTAGAACACTTAAACTTGGAAGTTAAATTGTCTTTC
AATGTGTTTGGCAGAGTTATAAAAGTAGACATGAGCCATATTGATAGCGGCACGGCATATGAAGAGCTTCAGAATACTTATGACACTTCTTTGACGTTCT
GTGAAAGGCTATAGATAAGTACCTCCAAACATCATGCCTCCAGCCTCACTCTTGCTTAAGGAAATACTCTGAAAGTAGATTTTCTTTCTTTTTTGAGACA
GTCTCTCTGTCTCCCAGGCTGGAGTGCAGTGGCATGATCTTGGTTCACTGCAGCCTCCACCTCCTGGGTTCAACCGATTCTCCTTCTTCAGCCTCCCGAG
TAGCTGGGATTACAGGTGCCCACCACCACGCCTGGCTAATTTTTGTTCTTTTAGTAGAGACGGGGATTTGGTTGTGCCATGTTGGCCAGGCTGGTCTCAA
ACTCCTGACCGCAAGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACGGGCATGAGTTACTGCGCCCAGCCAAATATCTGTTCTTTTAGCTCT
TTGATAGTTCCTTTGTAGTGACAAATTATTTTTTAAAAGCTTATAAATTGGTGTTTCTGTGGAAGATGTTATTTCTCATCGAATGCGTATTGATAGTGTT
TTAAGTTTAGACCACAAAGTATTTGTCTTCCATGTGCCTGATATTTACATAGTACTCTAAGCTGCACTGTTGAGTACTGTAGCATCTAGCTTATATGGCT
ATTTAAATTTATATTAGGCTAAAAATTCACCAGTGCAGCCATATTTCAAGTTTTCAGTGGCTGTGAGTGGCCAATGGCTCTGTTGTATTGGACAGTACAG
ATATAGGACATATGCAGAAATTATCATTGGACAACCCTGCTGTAGAATGTCACCAGTGTTTCTGGAATCACTGTTTTCGTGCTTGAAGTATTTTGTGCTC
CACTTTGAAATGCTAGGAAATCGTGTCTTCCCTTCACATTGTAAACTCTTGGTGATTATTGTGGTCTTTGGAGGTGAAGCCCTTGGGCAGAATTGGGATG
GGAGTGGAAAGTAAACTGCTTTGCTGTGGACTAGAAGTAGAATTGGGATGAGGTGTTCCCGTTCTCATGAGTCCCTTCCCTGTCTGCACTGTTCCCTTTC
CTTGTGAACCTTTATTTCCCAAACCCCTTCTTCACCTTTTCCACCTCCAGCCTGTGCAGAGGCAGATAGATACTGGGGACCTGTTGTACTTTGTTCTGCA
TCTTCACTAGTGGAAATAAGAGTTCTCTTAGGCTCACTGCTCGGGGGTGGCCTGTAAGATGTTCTTGAGTCTAGTGCTTTCTCTTTTAATTTGGGTGCCT
TGTGTCATTGGATGTGTAATGTGGTCTCGAGCTAAATGTGCAGACAGCAGCATCTGAGACATATCCAGAGAGCAGAGGCAGCATTTCTTTGAATTCAGCA
AAACCATAATTATTGTGTTTTCTTTTCAGAACTGTGTTTTACGCAAATAATCTTCGGCAAAGTCTTACTCTTATTGTAGATACTCATTTTAATTCTGTGT
GTTAACTTGCACCACAGTTTTGCATAATTTACTATCCTCCTCCAGAAAGCTCTACAGTGTTCCATTGGTCAACGCTTTTGCCAGTAATGTCAGAAATAAT
GGGTTGGGTGATCTTACTTTCTATATTTAAACAAAATTTTGTCAATTTTCAGTTAGTTGCTTGTTTTCCCTGACCACTGGGCTATCTCGTATTTCTGGTC
TTCAGTCATGTTGTTCCTTTTGTGTGGTGTAACCTTTAGCATTTACGTGCCTTGGCCACCTCTCGTTGCTTAGAACAGACCCAATCTCCAGAAGGTTTTC
TGGGTGTTCTTCTTTTCCCTCGGGTTCCCCTTTGCTGCCCCGAGCACCATTGTGTACCTCTTGCCACAGTGTGCTTTTGTTACTCCATTTCACAGTAGGT
TCCTCTATCAGCATCTTGCACAGTTGCCTAGCAACATAGTTTAATGTGTTGGAGGCAAGAAGGGAGGAAATTCACACCATGTTCATCCTACTCAGTGTGA
ACTGAGTCTATAGTTGATATCCTCTTTGTGTCACTCAATGTTGTCCTGCCTGAGTTCAGGCTTGGTTCTTACGTTGCGGCAGCTCTTTTGCCTTTATTTA
GGCAACAGACCAGAAATAGAAACCCTTGAATTTTTTTTTTTTTATTCCTTTATTTTCCTTGCCAGCACCTTGGTTAGATTTCTTAACTACTTTTTTCTTG
AGTCTTTGTAAAGTATAATTACACTTTACTGTGCTTACGATCTAAAGAATACTTAATCAGTGTTATTTTTTATTTTTATGTTTTATTTTTGTATTGATTA
GGTCTTGCCATGTTGCCCAGACTGGTCTCGGACTCCTGGACTCAAGCAGTCCTCCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGGGCCACCA
CACTTGGCCTCACTTTTATTTCTTAAAGTCACTGCCCAATAAACATTCCAAGTTTCCACTAGTTTTTGTTTTTGGACATTTGTTCCATCC

Expression



Full and truncated open reading frames discovered in TCONS_00195633

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.