| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000257287 | centrosomal protein 135kDa | protein coding | ENST00000578929 | 523 | 307 | UTR3 | Trans | |
| ENST00000482603 | glyoxylate reductase/hydroxypyruvate reductase | processed transcript | ENST00000578929 | 516 | 291 | noncoding | Trans | |
| ENST00000513143 | podoplanin | protein coding | ENST00000578929 | 511 | 306 | UTR5 | Trans | |
| ENST00000542869 | protein tyrosine kinase 6 | protein coding | ENST00000578929 | 528 | 319 | UTR3 | Trans | |
| ENST00000552918 | spermatogenesis associated, serine-rich 2 | protein coding | ENST00000578929 | 518 | 284 | UTR3 | Trans | |
| ENST00000612932 | suppressor of cytokine signaling 7 | protein coding | ENST00000578929 | 537 | 296 | UTR3 | Trans | |
| TCONS_00030130 | calcium/calmodulin-dependent protein kinase II gamma | novel protein coding | ENST00000578929 | 587 | 299 | UTR3 | Trans | |
| TCONS_00030132 | calcium/calmodulin-dependent protein kinase II gamma | novel protein coding | ENST00000578929 | 587 | 299 | UTR3 | Trans | |
| TCONS_00102928 | suppressor of cytokine signaling 7 | novel protein coding | ENST00000578929 | 537 | 296 | UTR3 | Trans | |
| TCONS_00102930 | suppressor of cytokine signaling 7 | novel protein coding | ENST00000578929 | 537 | 296 | UTR3 | Trans | |
| TCONS_00102933 | suppressor of cytokine signaling 7 | novel protein coding | ENST00000578929 | 537 | 296 | UTR3 | Trans | |
| TCONS_00148048 | potassium voltage-gated channel, subfamily G, member 3 | novel protein coding | ENST00000578929 | 504 | 301 | UTR3 | Trans | |
| TCONS_00219453 | WD repeat domain 27 | novel protein coding | ENST00000578929 | 617 | 289 | UTR3 | Trans |
>TCONS_00219453 (1283 nt)
GTAAAAACAGCTTTTTTTATTTTTTATTTTTTATTTTTTTTGAGACGGAGTCTCACACTGTCACCTGGGCTGGAGTGCAGTGGTGCGATCTTGGCTCACT
GCAGCCTCCACCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGCAGCTGGGATTACAGGCGCTCCCCCACCACGCCCAGCTAATTTTTGTTG
TATTTTTAGGACAGACGGCGTTTCACTGTTGGCCAGACTGGTCTCAAACTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAGAGTGCTGGGATTATA
GGTGTGAGCCACCGAACCTGGCCCAAAACAGCATTTTTGGAAGCTACATTCTGTGAGATGTTCACCTGTTTGCCACCTCTTCTCGTGAAAACCATAGTGA
GTGCCAGTGTGAAAGGAAGATTGCAGCGTATATGTCAAGTAGAAACATGTTTGAATTTTCCATTTGTCTGTGGGGAAGAAGGTAATAACAGTAATAACAG
ACTGAAGGACCAAAGGAAAATAGGGAAGACGTTGATTATGGACTTGGATCAGATTCTAGCTACATGATTTGAAAATGACACTGCCTCTCCTATTTTGCCA
CAAGCCTGTCATTTGGAGAACTGGCAGATCATTTATGTTCAGATTTAATTTTCTGTTTTAGAATCCCATGGAGTACATGTGAACATAGGAAAATCACACT
CAGCAGCCAAGCTATCCTTTTGCGATAATGAAATCACTTTAAAACCTATAACTTGATCTTAGGTTGGCAAATCTTAAACTTAACGATCCTTGAAATTTCC
TGCCTGCTGTGACTGTGATGCAGTTGGATTCAACTGGTTTACACTGCTCTTGGGTCGGCAAGACCAAAAAAGGTTGGACTGCACTGTAGCATGCTTATGG
GTTGAGGCAGTGGCAGAGGCAGAGGACTTGGCCGTCAGCCAGCCAGCACAGGCGTAAGAAAATAGCATGAGAAGTTTCACGAGCCTGAAACCATTGAGAC
AGTGATTACAACCTCCATATTAATCAGATGAGGGTTTGTAGGTGACATAGCATTTTACCCAAGTAATTCTGAACAGACTGTGGCTTATGATAATACATTT
TAACTAGCAAGTGTGTGGACTATAAAACAAATATCTAGAGTTATATATGGATGTACTATCATTTGGTGATAAAAGCATAGAAAAAGCATAAGTTGGAGTA
TACTGGGTTTTTTTGTTGTTGTTAAATTCTTTTCCATCAGAAGTAAGAGCTGTTGGCAGCAACTAATAAAATGCAACCTAGTGA
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.