| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000427746 | holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) | protein coding | ENST00000579449 | 510 | 293 | UTR5 | Trans | |
| ENST00000450928 | antisense | antisense | ENST00000579449 | 525 | 294 | noncoding | Trans | |
| ENST00000494969 | colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) | protein coding | ENST00000579449 | 548 | 290 | CDS | Trans | |
| ENST00000549365 | DNA-damage regulated autophagy modulator 1 | nonsense mediated decay | ENST00000579449 | 569 | 294 | CDS_UTR | Trans | |
| ENST00000572705 | transient receptor potential cation channel, subfamily V, member 1 | protein coding | ENST00000579449 | 600 | 283 | UTR3 | Trans | |
| TCONS_00030130 | calcium/calmodulin-dependent protein kinase II gamma | novel protein coding | ENST00000579449 | 630 | 288 | UTR3 | Trans | |
| TCONS_00067572 | DCN1, defective in cullin neddylation 1, domain containing 2 | novel protein coding | ENST00000579449 | 617 | 292 | UTR3 | Trans | |
| TCONS_00107851 | transient receptor potential cation channel, subfamily V, member 1 | novel protein coding | ENST00000579449 | 600 | 283 | UTR3 | Trans | |
| TCONS_00150627 | UDP-glucuronate decarboxylase 1 | novel protein coding | ENST00000579449 | 607 | 291 | UTR5 | Trans | |
| TCONS_00251973 | G protein-coupled receptor 34 | novel protein coding | ENST00000579449 | 550 | 288 | UTR3 | Trans |
>TCONS_00251973 (785 nt)
ATAATTTTTCAGTATATGTTCCAAAAATTGCATGGGATATGCTTATACTAAAAAAAAAAAAAAAATGTTGCTAGGCTGGACACGGTGGCTCATACCCGTA
ATCCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCACCTGAGGTCAGGAGTTCGAGACCAACCTGGGCAACATGGTGAAACCATCTCTACTAAAAATACA
AAAATTAGCCGGGTGTGGTGGTGCACACTTATAATCCCAGCTACTCAGGAGGCTGAGACAGGAGAATTGCTTGAACCTGGGAGGCAGAGGTCACAGTGAG
CCAAGATCACGCCACTATACTCCAGCCTGGGTGACAGAGTGAGACTCCGTTTAAAAAAAAAAGTTGCTAAATCTGGCCGTCCTAAACTAGATGGCAGACT
GAGAAATGTGACTCCCCTCCCCAGTACCTTGTTTTCTGTGTCCTTGTAGCCGTGGTCCTTCAGCATATCTCTGTGCTGCAGACAACACACCTTCCTGATG
GAGGTGCCCGGCTGTTGGAGAAGTCTGGGGGCTTGGAAATCATCTTTGATGTTTACCAGGCCGACGCTGTGGCCACATTCCGAAAGAATAACCCTGGCAA
ACCCTATGCCCGGATGTGCATTAGTGGATTTGATGAGCCTGTCCCAGACCTCTGCAGCCTCAAGCGGTTGTCTTACCAGAGTGGGGATGTCCCTCTGATC
TTTGCCCTGGTGGATCATGGTGACATCTCCTTCTACAGCTTCAGGGACTTCACGTTGCCCCAGGATGTGGGGCACTGACCTCACAG
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.