| Potential function |
Interacting transcript |
Gene description |
Transcript biotype |
lncRNA id |
Alignment score (LAST) |
Alignment length |
Transcript region involved in interaction |
Genomic orientation of interacting RNAs |
|
|
ENST00000265981 |
ring finger protein 141 |
protein coding |
ENST00000579483 |
621 |
270 |
UTR3 |
Trans |
|
|
ENST00000323699 |
delta(4)-desaturase, sphingolipid 1 |
protein coding |
ENST00000579483 |
580 |
291 |
UTR3 |
Trans |
|
|
ENST00000330676 |
TLC domain containing 2 |
protein coding |
ENST00000579483 |
612 |
280 |
UTR3 |
Trans |
|
|
ENST00000358157 |
sphingosine-1-phosphate receptor 3 |
protein coding |
ENST00000579483 |
643 |
287 |
UTR3 |
Trans |
|
|
ENST00000375846 |
sphingosine-1-phosphate receptor 3 |
protein coding |
ENST00000579483 |
643 |
287 |
UTR3 |
Trans |
|
|
ENST00000378004 |
Rho GTPase activating protein 26 |
protein coding |
ENST00000579483 |
536 |
289 |
UTR3 |
Trans |
|
|
ENST00000389534 |
zinc finger protein 841 |
protein coding |
ENST00000579483 |
630 |
265 |
UTR3 |
Trans |
|
|
ENST00000391877 |
delta(4)-desaturase, sphingolipid 1 |
protein coding |
ENST00000579483 |
580 |
291 |
UTR3 |
Trans |
|
|
ENST00000422247 |
centrosomal protein 135kDa |
protein coding |
ENST00000579483 |
642 |
277 |
UTR3 |
Trans |
|
|
ENST00000426391 |
zinc finger protein 841 |
protein coding |
ENST00000579483 |
630 |
265 |
UTR3 |
Trans |
|
|
ENST00000463899 |
N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase) |
processed transcript |
ENST00000579483 |
545 |
283 |
noncoding |
Trans |
|
|
ENST00000494969 |
colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) |
protein coding |
ENST00000579483 |
559 |
264 |
CDS_UTR |
Trans |
|
|
ENST00000498813 |
delta(4)-desaturase, sphingolipid 1 |
processed transcript |
ENST00000579483 |
606 |
291 |
noncoding |
Trans |
|
|
ENST00000513143 |
podoplanin |
protein coding |
ENST00000579483 |
582 |
288 |
UTR5 |
Trans |
|
|
ENST00000534281 |
ring finger protein 141 |
retained intron |
ENST00000579483 |
621 |
270 |
noncoding |
Trans |
|
|
ENST00000560870 |
sense_intronic |
sense intronic |
ENST00000579483 |
559 |
268 |
noncoding |
Trans |
|
|
ENST00000591226 |
tropomyosin 4 |
retained intron |
ENST00000579483 |
629 |
285 |
noncoding |
Trans |
|
|
ENST00000592474 |
phosphoribosyl pyrophosphate synthetase-associated protein 1 |
retained intron |
ENST00000579483 |
603 |
270 |
noncoding |
Trans |
|
|
ENST00000593250 |
centrosomal protein 76kDa |
nonsense mediated decay |
ENST00000579483 |
601 |
264 |
UTR3 |
Trans |
|
|
ENST00000594295 |
zinc finger protein 841 |
protein coding |
ENST00000579483 |
630 |
265 |
UTR3 |
Trans |
|
|
ENST00000620139 |
melanoregulin |
protein coding |
ENST00000579483 |
634 |
288 |
UTR3 |
Trans |
|
|
TCONS_00001821 |
low density lipoprotein receptor adaptor protein 1 |
novel protein coding |
ENST00000579483 |
622 |
277 |
UTR5 |
Trans |
|
|
TCONS_00001823 |
low density lipoprotein receptor adaptor protein 1 |
novel protein coding |
ENST00000579483 |
622 |
277 |
UTR5 |
Trans |
|
|
TCONS_00004721 |
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 |
novel protein coding |
ENST00000579483 |
622 |
296 |
UTR5 |
Trans |
|
|
TCONS_00020726 |
processed_transcript |
novel protein coding |
ENST00000579483 |
627 |
287 |
UTR5 |
Trans |
|
|
TCONS_00020768 |
processed_transcript |
novel protein coding |
ENST00000579483 |
627 |
287 |
UTR5 |
Trans |
|
|
TCONS_00028040 |
ankyrin repeat domain 16 |
novel protein coding |
ENST00000579483 |
650 |
286 |
UTR3 |
Trans |
|
|
TCONS_00030130 |
calcium/calmodulin-dependent protein kinase II gamma |
novel protein coding |
ENST00000579483 |
678 |
285 |
UTR3 |
Trans |
|
|
TCONS_00041545 |
ring finger protein 141 |
novel protein coding |
ENST00000579483 |
621 |
270 |
UTR3 |
Trans |
|
|
TCONS_00041546 |
ring finger protein 141 |
novel protein coding |
ENST00000579483 |
621 |
270 |
UTR3 |
Trans |
|
|
TCONS_00047135 |
ubiquitin specific peptidase 28 |
novel protein coding |
ENST00000579483 |
610 |
272 |
UTR5 |
Trans |
|
|
TCONS_00053503 |
anoctamin 4 |
novel protein coding |
ENST00000579483 |
638 |
282 |
UTR3 |
Trans |
|
|
TCONS_00053513 |
anoctamin 4 |
novel protein coding |
ENST00000579483 |
638 |
282 |
UTR5 |
Trans |
|
|
TCONS_00053851 |
transmembrane protein 263 |
novel protein coding |
ENST00000579483 |
640 |
289 |
UTR5 |
Trans |
|
|
TCONS_00057949 |
solute carrier family 38, member 1 |
novel protein coding |
ENST00000579483 |
612 |
283 |
UTR5 |
Trans |
|
|
TCONS_00057952 |
solute carrier family 38, member 1 |
novel protein coding |
ENST00000579483 |
612 |
283 |
UTR5 |
Trans |
|
|
TCONS_00057960 |
solute carrier family 38, member 1 |
novel protein coding |
ENST00000579483 |
612 |
283 |
UTR5 |
Trans |
|
|
TCONS_00062678 |
hydroxycarboxylic acid receptor 3 |
novel protein coding |
ENST00000579483 |
602 |
286 |
UTR3 |
Trans |
|
|
TCONS_00075813 |
forkhead box N3 |
novel protein coding |
ENST00000579483 |
639 |
288 |
UTR5 |
Trans |
|
|
TCONS_00075827 |
forkhead box N3 |
novel protein coding |
ENST00000579483 |
639 |
288 |
UTR3 |
Trans |
|
|
TCONS_00075827 |
forkhead box N3 |
novel protein coding |
ENST00000579483 |
610 |
280 |
UTR3 |
Trans |
|
|
TCONS_00075840 |
forkhead box N3 |
novel protein coding |
ENST00000579483 |
619 |
288 |
UTR3 |
Trans |
|
|
TCONS_00075841 |
forkhead box N3 |
novel protein coding |
ENST00000579483 |
619 |
288 |
UTR3 |
Trans |
|
|
TCONS_00076763 |
protein phosphatase 1, regulatory subunit 13B |
novel protein coding |
ENST00000579483 |
635 |
285 |
UTR3 |
Trans |
|
|
TCONS_00098643 |
fatty acid 2-hydroxylase |
novel protein coding |
ENST00000579483 |
676 |
282 |
UTR5 |
Trans |
|
|
TCONS_00098644 |
fatty acid 2-hydroxylase |
novel protein coding |
ENST00000579483 |
676 |
282 |
UTR3 |
Trans |
|
|
TCONS_00098645 |
fatty acid 2-hydroxylase |
novel protein coding |
ENST00000579483 |
676 |
282 |
UTR3 |
Trans |
|
|
TCONS_00098647 |
fatty acid 2-hydroxylase |
novel protein coding |
ENST00000579483 |
676 |
282 |
UTR3 |
Trans |
|
|
TCONS_00107851 |
transient receptor potential cation channel, subfamily V, member 1 |
novel protein coding |
ENST00000579483 |
613 |
283 |
UTR5 |
Trans |
|
|
TCONS_00107851 |
transient receptor potential cation channel, subfamily V, member 1 |
novel protein coding |
ENST00000579483 |
602 |
290 |
UTR5 |
Trans |
|
|
TCONS_00107864 |
transient receptor potential cation channel, subfamily V, member 1 |
novel protein coding |
ENST00000579483 |
602 |
290 |
UTR3 |
Trans |
|
|
TCONS_00108999 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000579483 |
637 |
272 |
UTR5 |
Trans |
|
|
TCONS_00109000 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000579483 |
637 |
272 |
UTR5 |
Trans |
|
|
TCONS_00109009 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000579483 |
637 |
272 |
UTR5 |
Trans |
|
|
TCONS_00109011 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000579483 |
637 |
272 |
UTR5 |
Trans |
|
|
TCONS_00109012 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000579483 |
637 |
272 |
UTR5 |
Trans |
|
|
TCONS_00109013 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000579483 |
637 |
272 |
UTR5 |
Trans |
|
|
TCONS_00109014 |
trans-golgi network vesicle protein 23 homolog C (S. cerevisiae) |
novel protein coding |
ENST00000579483 |
637 |
272 |
UTR5 |
Trans |
|
|
TCONS_00116668 |
desmoglein 3 |
novel protein coding |
ENST00000579483 |
664 |
289 |
UTR3 |
Trans |
|
|
TCONS_00117136 |
CBP80/20-dependent translation initiation factor |
novel protein coding |
ENST00000579483 |
621 |
276 |
UTR3 |
Trans |
|
|
TCONS_00119477 |
zinc finger and BTB domain containing 7C |
novel protein coding |
ENST00000579483 |
616 |
306 |
UTR5 |
Trans |
|
|
TCONS_00124891 |
zinc finger protein 540 |
novel protein coding |
ENST00000579483 |
622 |
288 |
UTR5 |
Trans |
|
|
TCONS_00124891 |
zinc finger protein 540 |
novel protein coding |
ENST00000579483 |
613 |
265 |
UTR5 |
Trans |
|
|
TCONS_00132233 |
zinc finger protein 43 |
novel protein coding |
ENST00000579483 |
609 |
269 |
UTR5 |
Trans |
|
|
TCONS_00135631 |
zinc finger protein 841 |
novel protein coding |
ENST00000579483 |
630 |
265 |
UTR3 |
Trans |
|
|
TCONS_00135631 |
zinc finger protein 841 |
novel protein coding |
ENST00000579483 |
602 |
268 |
UTR3 |
Trans |
|
|
TCONS_00135644 |
zinc finger protein 841 |
novel protein coding |
ENST00000579483 |
630 |
265 |
UTR3 |
Trans |
|
|
TCONS_00135884 |
zinc finger protein 347 |
novel protein coding |
ENST00000579483 |
603 |
264 |
UTR3 |
Trans |
|
|
TCONS_00141667 |
Rho guanine nucleotide exchange factor (GEF) 4 |
novel protein coding |
ENST00000579483 |
639 |
281 |
UTR3 |
Trans |
|
|
TCONS_00141679 |
Rho guanine nucleotide exchange factor (GEF) 4 |
novel protein coding |
ENST00000579483 |
639 |
281 |
UTR3 |
Trans |
|
|
TCONS_00142157 |
LY6/PLAUR domain containing 6B |
novel noncoding |
ENST00000579483 |
620 |
290 |
noncoding |
Trans |
|
|
TCONS_00142168 |
LY6/PLAUR domain containing 6B |
novel protein coding |
ENST00000579483 |
620 |
290 |
UTR3 |
Trans |
|
|
TCONS_00142174 |
LY6/PLAUR domain containing 6B |
novel protein coding |
ENST00000579483 |
620 |
290 |
UTR3 |
Trans |
|
|
TCONS_00147093 |
ATPase family, AAA domain containing 2B |
novel protein coding |
ENST00000579483 |
619 |
284 |
UTR3 |
Trans |
|
|
TCONS_00147113 |
ATPase family, AAA domain containing 2B |
novel protein coding |
ENST00000579483 |
619 |
284 |
UTR5 |
Trans |
|
|
TCONS_00150696 |
septin 10 |
novel protein coding |
ENST00000579483 |
653 |
292 |
UTR3 |
Trans |
|
|
TCONS_00163367 |
runt-related transcription factor 1 |
novel protein coding |
ENST00000579483 |
627 |
284 |
UTR3 |
Trans |
|
|
TCONS_00165341 |
TTC28 antisense RNA 1 |
novel protein coding |
ENST00000579483 |
601 |
261 |
UTR5 |
Trans |
|
|
TCONS_00165341 |
TTC28 antisense RNA 1 |
novel protein coding |
ENST00000579483 |
635 |
289 |
UTR5 |
Trans |
|
|
TCONS_00165715 |
LIM domain kinase 2 |
novel protein coding |
ENST00000579483 |
627 |
295 |
UTR3 |
Trans |
|
|
TCONS_00165721 |
LIM domain kinase 2 |
novel protein coding |
ENST00000579483 |
627 |
295 |
UTR3 |
Trans |
|
|
TCONS_00184373 |
neutral cholesterol ester hydrolase 1 |
novel protein coding |
ENST00000579483 |
617 |
287 |
UTR3 |
Trans |
|
|
TCONS_00185516 |
transcribed_unprocessed_pseudogene |
novel protein coding |
ENST00000579483 |
652 |
298 |
UTR5 |
Trans |
|
|
TCONS_00185519 |
transcribed_unprocessed_pseudogene |
novel protein coding |
ENST00000579483 |
652 |
298 |
UTR3 |
Trans |
|
|
TCONS_00190999 |
zinc finger protein 721 |
novel protein coding |
ENST00000579483 |
605 |
284 |
UTR3 |
Trans |
|
|
TCONS_00192322 |
tec protein tyrosine kinase |
novel protein coding |
ENST00000579483 |
631 |
292 |
UTR5 |
Trans |
|
|
TCONS_00195633 |
aspartylglucosaminidase |
novel protein coding |
ENST00000579483 |
573 |
287 |
UTR3 |
Trans |
|
|
TCONS_00202516 |
family with sequence similarity 173, member B |
novel protein coding |
ENST00000579483 |
638 |
268 |
UTR3 |
Trans |
|
|
TCONS_00203984 |
family with sequence similarity 169, member A |
novel protein coding |
ENST00000579483 |
643 |
283 |
UTR5 |
Trans |
|
|
TCONS_00203985 |
family with sequence similarity 169, member A |
novel protein coding |
ENST00000579483 |
643 |
283 |
UTR5 |
Trans |
|
|
TCONS_00203985 |
family with sequence similarity 169, member A |
novel protein coding |
ENST00000579483 |
632 |
284 |
UTR5 |
Trans |
|
|
TCONS_00204896 |
erythrocyte membrane protein band 4.1 like 4A |
novel protein coding |
ENST00000579483 |
636 |
269 |
UTR5 |
Trans |
|
|
TCONS_00213191 |
tubby like protein 4 |
novel protein coding |
ENST00000579483 |
661 |
287 |
UTR5 |
Trans |
|
|
TCONS_00213738 |
enoyl-CoA delta isomerase 2 |
novel protein coding |
ENST00000579483 |
621 |
287 |
UTR3 |
Trans |
|
|
TCONS_00216910 |
high mobility group nucleosomal binding domain 3 |
novel noncoding |
ENST00000579483 |
644 |
288 |
noncoding |
Trans |
|
|
TCONS_00233718 |
pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 |
novel protein coding |
ENST00000579483 |
620 |
282 |
UTR5 |
Trans |
|
|
TCONS_00235393 |
processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae) |
novel protein coding |
ENST00000579483 |
616 |
287 |
UTR5 |
Trans |
|
|
TCONS_00240688 |
metastasis suppressor 1 |
novel protein coding |
ENST00000579483 |
611 |
284 |
UTR5 |
Trans |
|
|
TCONS_00240688 |
metastasis suppressor 1 |
novel protein coding |
ENST00000579483 |
631 |
277 |
UTR3 |
Trans |
|
|
TCONS_00243477 |
osteoclast stimulating factor 1 |
novel protein coding |
ENST00000579483 |
613 |
265 |
UTR5 |
Trans |
|
|
TCONS_00243482 |
osteoclast stimulating factor 1 |
novel protein coding |
ENST00000579483 |
613 |
265 |
UTR5 |
Trans |
|
|
TCONS_00244326 |
transforming growth factor, beta receptor 1 |
novel protein coding |
ENST00000579483 |
622 |
252 |
UTR5 |
Trans |
|
|
TCONS_00247058 |
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 |
novel protein coding |
ENST00000579483 |
648 |
282 |
UTR3 |
Trans |