Detailed information on ENST00000584382

lncRNA-RNA interactions

Number of interactions: 4

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000560870 sense_intronic sense intronic ENST00000584382 513 224 noncoding Trans
ENST00000620139 melanoregulin protein coding ENST00000584382 501 263 UTR3 Trans
TCONS_00095053 epithelial membrane protein 2 novel protein coding ENST00000584382 530 246 UTR3 Trans
TCONS_00195633 aspartylglucosaminidase novel protein coding ENST00000584382 501 240 UTR3 Trans

Sequence

>ENST00000584382 (2780 nt)
CTTTCTGTTTCTATGAATTTGACTACCCTGGATACCTCAAATAAGTGGCGTCATACAGTATTTGTCTTTTTATAACTGGCTTGTTTCCGTTAGTGTAATG<br />TCTTCAAGGTTAATCCACATTGCAGCATATGTCAGAATTTCCTACCTTTTAAAGGCTGAATAATATTCTGTTATTTGTGTAAACCACATTTTCTTTATCC<br />ATTCAGGACATTTGGGTTACTTTCACCTTTTGGTTATTGTAAATAATGCTGCCATGAACATGGGTGTGCAGATACCACTTCAAGACCCTGCTTTCAGTTC<br />TTTTGCATATGTACCTAGAAGTAGGGTTGCTGGATCATATGGTAATTCTATTTGTAATATGTTGAGGAACTGTTTTACTGTTTTCCATAGGTATATGCAC<br />TATTTTACTTTCCCATCAGTAGTGCACAAGGGTTCCAATTTCTCCATATCCTCATTTACGTTTGTTATTTTGTGTCTTTTTTTTTATTTTTTTGAGACAG<br />AGTCTCACTCTGTTGCCCAGGCGGAGGTTGCAGTGAGCTGAGATTGTGCCACTGCACTCCAGCCTGGGTGAAAGAGCAAGACTCTGTCTCAAAAAAAAAA<br />AAAAAAAAAAAGGAAAGAAAATACAGTAGTCTCCCCGCTCCCCCCACAACCACTTATCAGCAGTTTTGCTTTCTATGGTTTGTTGCCCACAGTCAACTGC<br />AGTCTGAAAATGTTAAATGGAAAATTCCAGAAATAAACAATTCATAAGTTTAAAATTGCATGCTGTTTTGAGTAGTGTGATGAAATCTCACACAGTCCTG<br />CTTCGTCTTACTTGGGATGCAAATCATCCCTTTGTCCAGTGTATCCACACTGTGTATGGTACCTGCCTGTTAGTCACTTAGTAGCCATCTCATTTATCAG<br />ATTGACTGTCATGATATTGTAGTGCTGTGTTCAGTTAACCCTTATTTTATATAGTAATGGCCCCAAGGAGGAGGAGCAGTGACGCTGGAATATTGTTATA<br />ATTGTTCTTTTTTTAAAATTAGTTATTATTGTCGATCTCTTACTGTGTCTTATAAATTAAACTTTTTTATAGGCATGTATGTGTAGGAAAAAAACATAGT<br />ATATATATAGGGTTCAGTACTATCCCTGGATTCAGGCATCCACTGGGGCTCTTGGAACTTATGCCCCATGGATAAGGGGAGACTACTGTATCTTTATTTC<br />TCCCTTATTCTTGAATGATAGTTTTGCTGGATATATAGAATTCTGGACAGTTATGTTTCCCTCAGTATGTTAAAGATACTATTTCACTATCTGTCTGCTA<br />TCATAGCCATTGAGAATTCAGTTGACATAATTGCCTTTATTTTATAGGTGACATTTTCTCTCCAGTTGTTTTTTTAGGTCTCCTTTTTGTTGTTTGTTCT<br />GTAGTTTCACCAAAATGTTTGTAGGTATATGGATCTCTATTCTGCTTTGAGTTTTTGGACTTCTTGGGAGTGACATTTGTTGTTGTCTAACAGTTCTAAA<br />AAGCCATTACCTTCTCAAATATTGTTTCTTTTCTGTATTTCTATTAGTTTTCTTCTGGAACTACAATTAGATGTATGTAATATTGTTTGAGGCTGAGCCA<br />AGTAGTGTACTGTGATTAAGTTTACTTTCTGGTACAACTTTTTGTGTCTCCTAAATGTAATGTCTCATTTAGCCTCATTTTTTTCATTTGCTTCAGTTTT<br />TATGTAGCTATTGTTATTTCTTTCCATCATTAACACGTTCTCAGTACAGTTTTTCACATAGGGTCAAACCTGTTAATCTGTTCAGTGTGACCATTTTCCT<br />TGAGGATTTCCTCCCATGCTAGTGTTTAGAATTGGCTGCTTGCTATACCAGGTGTGCAGCTATCATCCTGTGTTCTCCCTTCAGCATCATTTTGGAAATT<br />CCTATTGCTTGTCTCCTGTGTTGATTCCCTTGTTTTGTGGATCTCATTCATTTACAACACACCTTCCACTAGCTTGCTGGAAAAAAAAAAAAGTACAAAG<br />GAGATAAATTTTGAGACCTTGAATGTTTGAGAATGTCTTTATTCTACCTTTTTTGAAAAAAAAATTGATAATTTGTCTAGGTCTTAAGTTCTAATATGAA<br />ATAATTTTTTTTCTCAGAATTTGGAAAGAATTTCTCCATTGCCTTTTAGTTTATCACTGAGATTATTGCTAACCCCAATGCCATTCTGGTTTCTGTTACG<br />TTGTCATCAATCTGTTTATTTTTTCTTTTCTAGAATCCTTGGAATTTTTTTTTATTTGTCCTTGCTATTCTGCAGTTCAATAATAACATGTTGGGATACC<br />AAATGGGTCTTACTTAGTTTAGAGACTCTTCAAGTCTGGAAAACTTCTTGTGTTATTCTCTGGCAACGTCTTCCTATCTTATTTATTAATTTTTTTCTTT<br />TTTTCACATGTTGGAATTGATTACTCATGTAATGTTTTACATTTTTTTCTTTCATGGTCTTTCTTTTGTTCTTTTTTTGTAGAAAATATCTTGACTTTAT<br />CTTCCAACTCTTTAATGTTTTCTTTCTTTCTTTCTTTTTTCTTGAGACAGGGTCTGGCTCTGTCGCCCAGGCTGGAGTGCAATGGCACGATCTCAGCACT<br />CTGCAACCTCCACCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTAGGATTACAGGTGCCTACTACCACACCTGGCTAATTTTTGTA<br />TTTTTAGTGGAGACAAAGTTTCACTATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCGCCTGGGC

Expression



Full and truncated open reading frames discovered in ENST00000584382

In silico ORF/peptide predictions
>peptide 1 (95 aa)
MNMGVQIPLQDPAFSSFAYVPRSRVAGSYGNSICNMLRNCFTVFHRYMHYFTFPSVVHKGSNFSISSFTFVILCLFFYFFETESHSVAQAEVAVS

>peptide 2 (80 aa)
MPFWFLLRCHQSVYFFFSRILGIFFYLSLLFCSSIITCWDTKWVLLSLETLQVWKTSCVILWQRLPILFINFFLFFTCWN

>peptide 3 (63 aa)
MLVFRIGCLLYQVCSYHPVFSLQHHFGNSYCLSPVLIPLFCGSHSFTTHLPLACWKKKKVQRR

>peptide 4 (58 aa)
MVFLLFFFCRKYLDFIFQLFNVFFLSFFFLETGSGSVAQAGVQWHDLSTLQPPPPGFK

>peptide 5 (54 aa)
MENSRNKQFISLKLHAVLSSVMKSHTVLLRLTWDANHPFVQCIHTVYGTCLLVT


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

Best hit to NONCODE v4:
NONHSAT052863 (Evalue: 0)

Best hit to Swiss-Prot:
sp|O00370|LORF2_HUMAN (Evalue: 4.0E-24)