Detailed information on ENST00000584382

lncRNA-RNA interactions

Number of interactions: 4

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000560870 sense_intronic sense intronic ENST00000584382 513 224 noncoding Trans
ENST00000620139 melanoregulin protein coding ENST00000584382 501 263 UTR3 Trans
TCONS_00095053 epithelial membrane protein 2 novel protein coding ENST00000584382 530 246 UTR3 Trans
TCONS_00195633 aspartylglucosaminidase novel protein coding ENST00000584382 501 240 UTR3 Trans

Sequence

>TCONS_00195633 (2779 nt)
CTTTCTGTTTCTATGAATTTGACTACCCTGGATACCTCAAATAAGTGGCGTCATACAGTATTTGTCTTTTTATAACTGGCTTGTTTCCGTTAGTGTAATG
TCTTCAAGGTTAATCCACATTGCAGCATATGTCAGAATTTCCTACCTTTTAAAGGCTGAATAATATTCTGTTATTTGTGTAAACCACATTTTCTTTATCC
ATTCAGGACATTTGGGTTACTTTCACCTTTTGGTTATTGTAAATAATGCTGCCATGAACATGGGTGTGCAGATACCACTTCAAGACCCTGCTTTCAGTTC
TTTTGCATATGTACCTAGAAGTAGGGTTGCTGGATCATATGGTAATTCTATTTGTAATATGTTGAGGAACTGTTTTACTGTTTTCCATAGGTATATGCAC
TATTTTACTTTCCCATCAGTAGTGCACAAGGGTTCCAATTTCTCCATATCCTCATTTACGTTTGTTATTTTGTGTCTTTTTTTTTATTTTTTTGAGACAG
AGTCTCACTCTGTTGCCCAGGCGGAGGTTGCAGTGAGCTGAGATTGTGCCACTGCACTCCAGCCTGGGTGAAAGAGCAAGACTCTGTCTCAAAAAAAAAA
AAAAAAAAAAAGGAAAGAAAATACAGTAGTCTCCCCGCTCCCCCCACAACCACTTATCAGCAGTTTTGCTTTCTATGGTTTGTTGCCCACAGTCAACTGC
AGTCTGAAAATGTTAAATGGAAAATTCCAGAAATAAACAATTCATAAGTTTAAAATTGCATGCTGTTTTGAGTAGTGTGATGAAATCTCACACAGTCCTG
CTTCGTCTTACTTGGGATGCAAATCATCCCTTTGTCCAGTGTATCCACACTGTGTATGGTACCTGCCTGTTAGTCACTTAGTAGCCATCTCATTTATCAG
ATTGACTGTCATGATATTGTAGTGCTGTGTTCAGTTAACCCTTATTTTATATAGTAATGGCCCCAAGGAGGAGGAGCAGTGACGCTGGAATATTGTTATA
ATTGTTCTTTTTTTAAAATTAGTTATTATTGTCGATCTCTTACTGTGTCTTATAAATTAAACTTTTTTATAGGCATGTATGTGTAGGAAAAAAACATAGT
ATATATATAGGGTTCAGTACTATCCCTGGATTCAGGCATCCACTGGGGCTCTTGGAACTTATGCCCCATGGATAAGGGGAGACTACTGTATCTTTATTTC
TCCCTTATTCTTGAATGATAGTTTTGCTGGATATATAGAATTCTGGACAGTTATGTTTCCCTCAGTATGTTAAAGATACTATTTCACTATCTGTCTGCTA
TCATAGCCATTGAGAATTCAGTTGACATAATTGCCTTTATTTTATAGGTGACATTTTCTCTCCAGTTGTTTTTTTAGGTCTCCTTTTTGTTGTTTGTTCT
GTAGTTTCACCAAAATGTTTGTAGGTATATGGATCTCTATTCTGCTTTGAGTTTTTGGACTTCTTGGGAGTGACATTTGTTGTTGTCTAACAGTTCTAAA
AAGCCATTACCTTCTCAAATATTGTTTCTTTTCTGTATTTCTATTAGTTTTCTTCTGGAACTACAATTAGATGTATGTAATATTGTTTGAGGCTGAGCCA
AGTAGTGTACTGTGATTAAGTTTACTTTCTGGTACAACTTTTTGTGTCTCCTAAATGTAATGTCTCATTTAGCCTCATTTTTTTCATTTGCTTCAGTTTT
TATGTAGCTATTGTTATTTCTTTCCATCATTAACACGTTCTCAGTACAGTTTTTCACATAGGGTCAAACCTGTTAATCTGTTCAGTGTGACCATTTTCCT
TGAGGATTTCCTCCCATGCTAGTGTTTAGAATTGGCTGCTTGCTATACCAGGTGTGCAGCTATCATCCTGTGTTCTCCCTTCAGCATCATTTTGGAAATT
CCTATTGCTTGTCTCCTGTGTTGATTCCCTTGTTTTGTGGATCTCATTCATTTACAACACACCTTCCACTAGCTTGCTGGAAAAAAAAAAAAGTACAAAG
GAGATAAATTTTGAGACCTTGAATGTTTGAGAATGTCTTTATTCTACCTTTTTTGAAAAAAAAATTGATAATTTGTCTAGGTCTTAAGTTCTAATATGAA
ATAATTTTTTTTCTCAGAATTTGGAAAGAATTTCTCCATTGCCTTTTAGTTTATCACTGAGATTATTGCTAACCCCAATGCCATTCTGGTTTCTGTTACG
TTGTCATCAATCTGTTTATTTTTTCTTTTCTAGAATCCTTGGAATTTTTTTTTATTTGTCCTTGCTATTCTGCAGTTCAATAATAACATGTTGGGATACC
AAATGGGTCTTACTTAGTTTAGAGACTCTTCAAGTCTGGAAAACTTCTTGTGTTATTCTCTGGCAACGTCTTCCTATCTTATTTATTAATTTTTTTCTTT
TTTTCACATGTTGGAATTGATTACTCATGTAATGTTTTACATTTTTTTCTTTCATGGTCTTTCTTTTGTTCTTTTTTTGTAGAAAATATCTTGACTTTAT
CTTCCAACTCTTTAATGTTTTCTTTCTTTCTTTCTTTTTTCTTGAGACAGGGTCTGGCTCTGTCGCCCAGGCTGGAGTGCAATGGCACGATCTCAGCACT
CTGCAACCTCCACCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTAGGATTACAGGTGCCTACTACCACACCTGGCTAATTTTTGTA
TTTTTAGTGGAGACAAAGTTTCACTATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCGCCTGGGC

Expression



Full and truncated open reading frames discovered in TCONS_00195633

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.