Detailed information on ENST00000585888

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00030588 cytoplasmic polyadenylation element binding protein 3 novel protein coding ENST00000585888 577 248 UTR3 Trans
TCONS_00184373 neutral cholesterol ester hydrolase 1 novel protein coding ENST00000585888 601 245 UTR3 Trans

Sequence

>TCONS_00184373 (745 nt)
CAGTGGCAGGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGGCTCTGTCTCCCAAGTAGCTGGGAATACAGGTGCCCGCCAC
CACGCCCAGCTAATTTTTTTGTATTTTTAGTAGAGACAGTGTTTCACCATGTTAGCCAGGATATTCTGGATCTCCTGACCTGGTGATCCGCCCACCTCGG
CCTCCCAAAGTGCTGGGATTACTGGCGTGAGCCACCGTGCCCGGCCGAAAATCAGTTAACTCTTCTTAGACCCAATAGAGAATTGAGGTTCAGGGCAAAC
TGCTGCTCCCAAAACTGGAGAGAGATGTGACTACAGAAAACCACAGCTACGGGTATCACAAACCCCAGCAAGAGAAACAAACAGCTGGAGCCAGTATCCA
TAGGAACACTGTAATGTAAATTGCTGGAGGTTCAACGTGGACTAGCTTGAGAATTAAAAGCTCAGGGGATGGGCAGTCTGGCTGCTGTTGCTTTGCCTAT
AAAATAAGAGGGTATATTACATGAATTATATGAAATGGTACATGGTATATCATGAACAACCAGGAGAATTATAACATTAAATTTATTCCGTCTGTCTGCA
TGTTTGTACCCTTTAACCCACTTCTCTTCATTCTCCCCAACACTCACCTTTCCCAGTCTCTTATCTTTTTACTCTCTACTCTCATGTGATCAAATTTTTT
TAGCTCTCACATATGTGAGAACATGTGATATCGCCCCAAATTTGTC

Expression



Full and truncated open reading frames discovered in TCONS_00184373

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.