| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000448214 | antisense | antisense | ENST00000587373 | 585 | 275 | noncoding | Trans | |
| ENST00000463496 | aryl hydrocarbon receptor | nonsense mediated decay | ENST00000587373 | 531 | 276 | UTR3 | Trans | |
| ENST00000620139 | melanoregulin | protein coding | ENST00000587373 | 599 | 279 | UTR3 | Trans | |
| TCONS_00030165 | antisense | novel protein coding | ENST00000587373 | 585 | 275 | UTR5 | Trans | |
| TCONS_00101169 | myosin phosphatase Rho interacting prote... | novel protein coding | ENST00000587373 | 579 | 267 | UTR3 | Trans | |
| TCONS_00116668 | desmoglein 3 | novel protein coding | ENST00000587373 | 547 | 252 | UTR3 | Trans | |
| TCONS_00149280 | Uncharacterized protein {ECO:0000313|Ens... | novel protein coding | ENST00000587373 | 602 | 258 | UTR3 | Trans | |
| TCONS_00240685 | metastasis suppressor 1 | novel protein coding | ENST00000587373 | 502 | 233 | UTR3 | Trans | |
| TCONS_00247297 | family with sequence similarity 166, mem... | novel protein coding | ENST00000587373 | 639 | 275 | UTR5 | Trans | |
| TCONS_00252827 | discs, large homolog 3 (Drosophila) | novel protein coding | ENST00000587373 | 622 | 265 | UTR5 | Trans |
>ENST00000587373 (722 nt)
ACGTTGATGGTGACAGCAGCAGTGACCGTAGCAGCCTAGAGGTGGCCGAATGCTTACTCTAATGGGCTGGCCCATCCCTGAGTGTCTAGAGTTCCCAGCC<br />CGCTTAAGGAAGGAAGGAAAACACAGGCAGCTCTAAGTGTACGACGAGGGAGGTCTCATCGGCGGTGAGGAAGCCCAGGCGGGTCCCCTTCCCAGCTGAA<br />AGGGGTTCGGAATTTCACTCTGTCGCCAGGCTGGAATGCAGTAGGGCAATCTCGGCTCACTGCAACCTCCACCTCCCGAGTTCAAGTGATGCTCCTGCTT<br />CGGCCTCCTGAGTAGCTGGGACTACAGGTGAGTGCCACCACATCCAGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGG<br />TATCAATCTCCTGACCTCGTGATCCATCTGTCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCGGCCATTGACTAAGGTCTTAAA<br />ATAGCTCTTCCTGCCTGTATAATCTCCATTATGGCAGGGCTCATATAAGAAGATGACAGTTCATCTGATGAGGAAGAAAACTTACTCCTAGTTAGATTGG<br />GTTGAATTCTTCCCTGTTTCCAGCGGTGTCTGCTCCTGGCACCTCAGGCACAGTCAGGGGTAGGAGGTGGTGATCAGATACACTCGCTGTGAGCAGTGCA<br />AGGGGAAGCAGGTGCCCAGAGG
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.