Detailed information on ENST00000587470

lncRNA-RNA interactions

No interactions found for this lncRNA.

Sequence

>ENST00000587470 (994 nt)
CCAGAGTACAGTATCAGCTGAGCTGACCTTACTCTGAGGACTAACTCTTTTGCTGGAAGCGGTTTCTGATTTACAGCTCTTGGTTTCTCCCAGACATGTT
GGTGGGAGAGATTTTGGTTTTTAAGGGGTTGTTAGATGGAGTAAATTTTCTTTTTTTTTTTTTTTTTTTTTAACTAAAAAGGGGTCACAGAATTTCAGCA
GTTCTCTGATTTTTATATTTTATTCCTCTTCCTATCCAATCCCTGCCTTTTGAGTCCAGGTGGTAAGTACATTTTCTTTAACGTTTTTCCTGCTTTTCTT
CCCAAATGTGTCTTTTTCTTTGGGCTACTGTACCCTGCTTCCAGTGCTGTCCCCGGCATAGGTCCATCTCTGCAGAAGCCATTTCAGGAGTACCTGGAGG
CTCAACGGCAGAAGCTTCACCACAAAAGCGAAATGGGCACACCACAGGGAGAAAACTGGTTGTCCTGGATGTTTGAAAAGTTGGTCGTTGTCATGGTGTG
TTACTTCATCCTATCTATCATTAACTCCATGGCACAAAGTTATGCCAAACGAATCCAGCAGCGGTTGAACTCAGAGGAGAAAACTAAATAAGTAGAGAAA
GTTTTAAACTGCAGAAATTGGAGTGGATGGGTTCTGCCTTAAATTGGGAGGACTCCAAGCCGGGAAGGAAAATTCCCTTTTCCAACCTGTATCAATTTTT
ACAACTTTTTTCCTGAAAGCAGTTTAGTCCATACTTTGCACTGACATACTTTTTCCTTCTGTGCTAAGGTAAGGTATCCACCCTCGATGCAATCCACCTT
GTGTTTTCTTAGGGTGGAATGTGATGTTCAGCAGCAAACTTGCAACAGACTGGCCTTCTGTTTGTTACTTTCAAAAGGCCCACATGATACAATTAGAGAA
TTCCCACCGCACAAAAAAAGTTCCTAAGTATGTTAAATATGTCAAGCTTTTTAGGCTTGTCACAAATGATTGCTTTGTTTTCCTAAGTCATCAAA

Expression



Full and truncated open reading frames discovered in ENST00000587470

In silico ORF/peptide predictions
>peptide 1 (57 aa)
MFSSKLATDWPSVCYFQKAHMIQLENSHRTKKVPKYVKYVKLFRLVTNDCFVFLSHQ

>peptide 2 (56 aa)
MCLFLWATVPCFQCCPRHRSISAEAISGVPGGSTAEASPQKRNGHTTGRKLVVLDV

>peptide 3 (52 aa)
MGTPQGENWLSWMFEKLVVVMVCYFILSIINSMAQSYAKRIQQRLNSEEKTK


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

Best hit to NONCODE v4:
NONHSAT055030 (Evalue: 0)

Best hit to Swiss-Prot:
sp|Q5R9K4|VMP1_PONAB (Evalue: 3e-46)