| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000391877 | delta(4)-desaturase, sphingolipid 1 | protein coding | ENST00000587795 | 527 | 262 | UTR3 | Trans | |
| ENST00000482603 | glyoxylate reductase/hydroxypyruvate reductase | processed transcript | ENST00000587795 | 538 | 266 | noncoding | Trans | |
| ENST00000560870 | sense_intronic | sense intronic | ENST00000587795 | 534 | 266 | noncoding | Trans | |
| ENST00000620139 | melanoregulin | protein coding | ENST00000587795 | 542 | 298 | UTR3 | Trans | |
| TCONS_00004721 | ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 | novel protein coding | ENST00000587795 | 605 | 265 | UTR5 | Trans | |
| TCONS_00009834 | SRY (sex determining region Y)-box 13 | novel protein coding | ENST00000587795 | 625 | 265 | UTR3 | Trans | |
| TCONS_00065864 | long intergenic non-protein coding RNA 412 | novel protein coding | ENST00000587795 | 607 | 269 | UTR3 | Trans | |
| TCONS_00095053 | epithelial membrane protein 2 | novel protein coding | ENST00000587795 | 603 | 266 | UTR3 | Trans | |
| TCONS_00124891 | zinc finger protein 540 | novel protein coding | ENST00000587795 | 604 | 269 | UTR5 | Trans | |
| TCONS_00195633 | aspartylglucosaminidase | novel protein coding | ENST00000587795 | 507 | 269 | UTR3 | Trans | |
| TCONS_00204911 | erythrocyte membrane protein band 4.1 like 4A | novel noncoding | ENST00000587795 | 627 | 270 | noncoding | Trans | |
| TCONS_00204916 | erythrocyte membrane protein band 4.1 like 4A | novel protein coding | ENST00000587795 | 627 | 270 | UTR3 | Trans | |
| TCONS_00240685 | metastasis suppressor 1 | novel protein coding | ENST00000587795 | 555 | 233 | UTR3 | Trans |
>TCONS_00240685 (1658 nt)
GGCCGAGGGAAACACAACCCCAAGCAGCCTGGAGTAAGTGGTCCCGAGGCAGCTCAAGACAGTTTGGTTTTATTCATTTCAGAGAGACAGGAATTGCAGG
GAAAATCATGAATCAGTGCCTGGAAGGTGTAAGTTCCATTGGCAGAAAGGGTGGGACCTGTGGAAGGGGGGTTAGAAGGCACAGGTAGTTGAGGGATTCT
GTAGGTGGCAGCTGGTTGAGAGTGTTGAATCTTTGTCTAAAGTTTGGAGGAGGTAGGAAGGAATGCTGAAGGAAGGGGGTCTGTTATCTGCCACTTCATT
CCATCCCAGCCAAAAAACAGACCTGTTTCTCGAGATTTTATGAATTCTAAGGCGTAACTTTACCTTTGCCTTGCGTGGCCTTAGGTCTTGTTTGTAATTT
GGTATCTTGTTGCCACAAGGAGTCTGTTTTTCCAGTCAGATAATGTCTGTTTTTACATGAATGTGCGTCAGTTGCTGCATGTAAACTCCTAAAGGGAGAG
GGTATAAGGAGACCTGTCTCACCTCCCATCCTGTCATACAGAGGCACTCAATTTTCAGGGTTTTTTGGGGGTTCCCTTGGCCAAGAGCCAGTCACTTCAC
TTAGCTGGGAAGGTACTTTGTTTTTGTTTTTGTTTGAGACAGAGTCTCCTGTAGCCCAGGGTGGTGTGCAGTGGCTCTATCTTGGCTCACTGCAACCTCC
ACCTTCCGGGTTCAAGCGATTCTCCTGCCTCAGCTTCCCGAGTGGCTGGGATTACAGGCATGTGCCACCACACCCGGCTAATTTTTGTATTTTTAGTAGA
GATGGGGTTTCACCATGTTGGCCAGGCTGTTCCTGAACTCCTGACCTCAAGTGATCCACTGGCCTCGGCCTCCCAAAATGCTGGGATTACATGTGTGAGC
CACCTCACCAGGCCAGAAGGTATGTTTTTATTTTTAGTTTACAGGTTGAAGGCTGGACTTTTATAAGGTACATGAGGAGACAAACCAGATAAATGCTTGA
TTGGTTGCAGAGATGCAGTCACCTTATTTGGACTTGTCAACCCGAAATAATCGAAAGTTTCAGATTTCAACTGGAAGAGTTTATTCAAGCAAAAAGATAG
CAATGGCCCATTTGGGAAAAACACAGACTCCAGAGAAATGGACTCAGTACTCCAAAATTGGAAGTTAAGTTCTTGCTTATATTACTGGGAAAAGAGGTCC
TGATCAGATCCCAAGAGAGTTCTTGGATCTCATACAGGAAGGAATTCAAGACGAGTCGGAAAGTACAGTGCAAAGAGAGTTTATTGAAAGCTACTCTGGG
CCAGCATGATGGCTTAGGCCTGTAATCTAAGCACTTTGGGAGGCCGAGGTGGGAGGATCACTTGAGGTCAGGAGTTTGAGACCAGCCTGGGCAATATAGT
GAAACCCCATCTCTTCCAAAAATAACAAAAATTAGCCGGGTGTGGTGGCCTGCACCTGTAGTCCCAGGTACTCGGGAGGCTGGATGGGACAATCACTTGA
ACCCGGGAGGCAGAGGTTGCAGCCCAGCTGAGGACACGCCACTGCACTCCAGCTTGGGTAACAGAGTGAGACCCCATCTCAAAAAACAAAAACAAAACAA
ACAAACAAGACAGAGTTCAAGACCAACGTGGCCAACACAGTGAGACCCTGTCTCTATTT
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.