Detailed information on ENST00000590829

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000479069 bone morphogenetic protein receptor, type II (serine/threonine kinase) processed transcript ENST00000590829 534 213 noncoding Trans
TCONS_00203663 ribosomal protein L3 pseudogene 6 novel protein coding ENST00000590829 540 213 UTR3 Trans

Sequence

>TCONS_00203663 (702 nt)
CTCTAGAGGCTTGCGTCCCGGGAGCCCGGCCTCGTGCGCCGCGCTTTGAGCAGCAGACTGCTCGACAAACACTGCGCCAAGAGCTCCTCAGCAGAAGCTC
CTCGCATCAGATCCTCTGTGCTGGGAATCCTCCCCTCTTGAGCACACTCTGTGCTCCTCTTCCAGTTACGGTGCATGTGAAGCAATGGTATGGGAAAATT
GTTTGCAGAAGGATGAAAAGGCTTTATTGCCAAACTGAACACAGGACTCACCGCTGTAGATACTTGCAGAAGCACTGAAGCTCCTGGAGGGTCTCCTTTG
CAGTCTGGAAGATTTCCTCCACGAGAAACAAGTCCACTAAGTGGGCACAGACATCCTCACAGCAACGGGCCACACGGACCCTCTGGTCTGTCTCTACTGC
ATTCCTAGAAACAGGGCAATCAGCATGGAAGACACTGCACTTGGGGCCCACAGACACTGAGGGCTTGCTTGAAAAGTGCAAGAGTCAGTCAGGCGCGGTG
GCTCACGCCTGTAATCCCAGCACTTTGGAAGGCCGAAGCGGGTGGATCATGAGGTCAAGAGATCCAGACCATCCTGGCTAACATGGTGAAACCCTGTCTC
TACTAAAAATACAAAAAAATTAGCCTGGTGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAAGCAGGAGAATGACGTGAAGCCGGGAGGC
AGA

Expression



Full and truncated open reading frames discovered in TCONS_00203663

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.