Detailed information on ENST00000591618

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00199319 sorting nexin 24 novel noncoding ENST00000591618 713 282 noncoding Trans

Sequence

>ENST00000591618 (538 nt)
TTTCCCGGCCCGGCAGTCCCGGATCAGGGAACCTAAACACCCCAAATGAGCGAGTCCGGGGAGCTGGGCCGGGATTTCCAGGCCCCCACCTTCCAGATGT<br />GATTTGATTTACAGGAGATTCTAGAACGGTCCAGTGATAACCCCCCTAAGGACCTGAGCCACCACCTAGAAAAGGCTCTTGACCTTTCACCCCCAGGCTC<br />TGTCACCCAGGCTGGAGTGCAATGGCGAGATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGG<br />GATTACAGGCGCCCGCCACCACGCCTGGCTACTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATATTGGCCAGGCTGGTCTCTTGGCCAGGCTGGTC<br />TCAAACTCCTGACCTCATGATCCGCCCACCTCGGCCTCCAAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCGGACAGTCTGTGGCTCAGGACATC<br />CCCAAGCTGCAGAAACTAGGCATCACCCATGTGCTGAA

Expression



Full and truncated open reading frames discovered in ENST00000591618

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

Best hit to NONCODE v4:
NONHSAT053874 (Evalue: 0)

Best hit to Swiss-Prot:
sp|Q8N2A0|CX062_HUMAN (Evalue: 4.0E-31)