Detailed information on ENST00000592021

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000588835 antisense antisense ENST00000592021 884 306 noncoding Cis

Sequence

>ENST00000588835 (2329 nt)
CATAAGCTTTTTTTTGTTTGTTTTTAATTTTATTAGAAGTGGGATCTCATTTTGTTGCCCATGCTGGTCTCAAACACCTGTCTTCAAGTGATCCTCCTGC
CTCAGCAGCATCAGTTTAATATCTAGATAAAATCTGATGTATGTAATTTTACTTTTAAGGGTTTTTTTCCAAACAGACGTCCTGACAATGTTGTTTCCTA
TTCCTTGAACATTCACCTGACGCTTATATACTGTCATTACTTTTATCTGTCAACTGATGTCAGCTACTCAATTTACACATTACTTTTGTGCATTTCATCC
TGTTTCTCAGTTTGACATTGTCATTCAAATTCAGAGTTTGACACTGAAACCCTGGGCATGGTGGCTCACACCTGTAATCCCAGCACTTCGGGAGACTGCG
GTAAGCAGATCATTTGAACCCAGGAGTTTGAGACTAGCCTTGGCAACATGGTGAAACCCCATCTCTACCAAAAAAAAAAAAAAAAAAAAAGCAAAAACAA
AAATTAACTGGGCATAGTTGCACACACCTGTAGTCCCAGCTACTCAGGAGGCTGAAGTGGGACGATCGCTTGAGCCCAGAAGGCAGAGGTTACGGTGAGT
AGAGATTGTGCCACTGCACTCCAGCCTGGACGACAGGGCAAGACGCTGTCTCAAAAATAAAATATTAGTAAAGAAGAGTACAATCAGAATATGAAAATGT
GTAAATGTGCATATTCTCTTTTTTTCTAATTTGGTAGCATTAAAAATACTTAAGCATCAAAGTTTGGCTTTATGAAGAAGGAGTCTGAGACACCTCAGGT
TTCAGCCCTTACTAATAGCGTGGCTCAAAGAGCGTTAACTTGCCTGTGCTTCTGTTTCCTTATCTGTAAAATGGGGATGATGCTGTAACATCAAAGAGCT
TATAATACTTTCCAGAGCTGGCAGTACTAAATAAGACCATTCCTCTAAAGTGCCAGCATTTTGAAAAGCATCAACCCATCAACCTTGTGCTTTAAATCTG
GCATTCTTAAAGCTATACCTGTAGGCAGTATAGAGTGTTTTTTTTTATTTGTTTTTTTGTTGTTGTCTTTTGAGTCTCACTCTGTCTCCCAGGCTGTAGT
GCAGTGGCACGTCTTGGTTCGCCGCAACCTCCGCCTCCCAGGTTCAAGCGATTCTCGTGCCTCAGCCCCCCGCATAGCTGGCATTACAGGCACACACCAC
CACGCCCAGCTAATTTTTGTAGTTTTAGTAGTATCTACTAAAATAAACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAGTGAT
CTGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGTCACCATGCCCGGCCGGCAGTGTATATCTTCTAAAGTTGCAATTTTTGTTCACTCC
AGAATCACTTTTCAAAAAGCATGCAGATTTAATGCCACCAGTTTGTGTTATGTATCTATCCCGCAAAACAGCTCTAAAGGTGATTTACTAAAAGATTAAC
AGCATTTATCTCTGGTGGGATAATTTTTCTTTGCTTGTTTACCTGTGTCTTGCAGATTTTACACAGTGAACAATGACTGTATAATTTTAAAATACAGATA
TGCACAATTGTGTAATGTAAATATGCTCAGCTTCAATACATTTAAGAACACATTTTTAACTTTTCGTAAGGAGTCTTCAGTTTAAAAGTACAGTGTCATT
ACAGAGTGCTTATTCTGTTACAAAATTAGTAAAGCTGATTCTGCCTCTAAATCTGAAGTAATTCCCACTTTTTTTCATGCTTGAGTTTAGTTGATAAATA
GCATTTTAGATACTAAAAATGATTGGATGAGTATTTCTACATTAATAAGTTGCTAATTAGGCACCAGGGTAGCAGATAGAATGCCTTTCTGTGTGCTAGG
TTTAAACATTTTACACACAGTCTTATTTAAAACAGCCTTGCAGTTTATAGATGAACTGATTGTTAGGCTAACCAGAGGTGTTACTATACCCTCCAGGATA
ACCCAGCTAGTAAGGGCAGAGCCAGGATGATTCAGACCCAGACCAGAGCCGGGTGTTTTGTCCACAGTACTGCTGCTGCTTATACCGTAACGGGAAAAGT
ACACAACAGTGTCTTAATATTTCATTCTTCCATGAAAAACACTTTTAAAATATTGAAACATTATAGGAGCAGAAGTACATCTCTAAATATACTTTTAGGT
CACATTGAAAACATTTCCAAAGGATTTGACCTGAAGTTAATGTTGCTACATTATGCTCAATACAGCAGGCTGTTCTGCTAGGGAAATTGTTAATATTTTA
AAAATATTTTCCTAAGCTTTAGCTTTACCA

Expression



Full and truncated open reading frames discovered in ENST00000588835

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

Best hit to NONCODE v4:
NONHSAT059522 (Evalue: 6e-167)