Detailed information on ENST00000594325

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
ENST00000593250 centrosomal protein 76kDa nonsense mediated decay ENST00000594325 507 287 UTR3 Trans
TCONS_00030130 calcium/calmodulin-dependent protein kinase II gamma novel protein coding ENST00000594325 616 284 UTR3 Trans

Sequence

>TCONS_00030130 (1019 nt)
GAGCGCCCGGGCCCGGGCGGCGGGGCGTGCGAACCGCGGGGCGGAGAGCCGAGCTCGGGGCCGGTGCGGCGCGAGCTCAAGCAGTTCCTGGGCTGGCTCA
AGAAGCACGCGTACTGCTCCAACCTCAGCTTCCGCCTCTACGACCAGTGGCGAGCCTGGATGCAGAAGTCGCACAAGACCCGCAACCAGGGGAAGGCTTC
AACCCAATTCGTGAAGGTATCAACACAGGCTAGTTTAGCGGCGGAAGGACTCGTCAGTATCTCCTGATGGAATAAGTACCCTTTGGCATCATCTTGCTAG
ATCCATCTTCCCTGAAGGCGGTCCCACCCTCTTCCACGGCAGCCAGGTCCTGATCTGCACAGGCTGCTCCTGCTGCCAGCCTGGATGGGAAGCCATCCCC
TACAACACACATGCCTTCCTGTCGCAGCCTCTCTCCTCTCTAACTCCAAGCTGGAGCACCCAACACTCTTAGCTTCCTTCTCAATTACACCAAAACTCTC
CAGACCCCACTTCTTGCCTTGACCCCAAACCACGAACATCACTTAGTATCTACCAACCACCTGCCAAGCATTGTTCACATATAAAAGTTGACTTAAAAAG
ACAAAGAATCGACCGGGCGCAGGGGCTCATGCCTGTAATCCCAGCACTTTGGAAGGCCGAGGCAGACGGATCATTTGAGGTCAAGAGTTCAAGATGAGCC
TGGCTAACATGGTGAAACTCCGTCTCTACTAAAACTACAAAAATCAACTGGGCGTGGTGGCAGGCGCCTATAATCCCAGCTACTCGGGAGGCTGAGGCAG
AAGAATCGCTCGAGCCCGGGAGGTGGAGATTGCAGTGAGCCGAGACCGCACCACTGAACTCCAGCTTAGGCGACAGAGCAAGACTCCATCTGAAAAAAAT
ACAAATAGTCTAAAGAAAAGTCTAAAAAGCAGACACTACCACCAGCTCCTCCTTACAGACGTAGTAATGGAGCCAGGTATGAAGACTCAGCTCGAGAAAT
TTAGTATTTCCAAAGCGACT

Expression



Full and truncated open reading frames discovered in TCONS_00030130

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.