Detailed information on ENST00000594413

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00065859 ubiquitin specific peptidase 12 novel protein coding ENST00000594413 602 240 UTR3 Trans

Sequence

>TCONS_00065859 (1541 nt)
TCTATTATTGATTTCTTATTTAATTTTGGTATAGCCAGAGAACACCATTTATGTGGATGATCTCGGCTCACCACAACCTCTGCCTCCTGGGTTCAAGCGG
TTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCATGTGCCACCATGCACGGCTAGTTTTGTATTTTTAGTGGAGATGGGGTTTCACCATGTTG
GTCAGGCTGGTCTTGAACTCCCGACCTGAGGTGATCCACTGCCTCAGCCTCCTAAAGTGCTGGGATTACAAGTGTGAGCCACCACGCCCGGCCTTGTGTG
GTTTTAATTTATTAAAAATTGTTAAAGTTTACTTTATGACCCAGAATATGATCTATCTGGGTATATGTTCTGTGGGCACTTGGAAAGAATATGTATTCTG
TTGCTCTTGAGTAGAGTGTTTTATAAATGTCCGTTATATTAAACCAGTTGATAATGTTATCCAGGTTTTATATATCCTTTTTGATTTCCATCTATTTGTT
TATCAGTTATTGAGAACAGAGTTATTGAAGTCTCCCAGTTATGACTGTGGATTTTTCCATGTCTCTTTTAGTTCTATCAATTTTTGCTTCATTTATTTTG
GATCTTTGTTAGTTGCATACTATATTTCAGTGTTTATCTTCTTGGTGAATTGACCCTTTTATCATTATGTAACTTCCCTATATTTATATCTTTATATTTA
AAATAGATTTCCTTAAACCATAAGACATTTGAGAAGTAAAAATAAAATAAAATAGCTTTCTTGCTGATAGCATATAGTCGGGTCTTGTTTTTTTCTTTTT
CCAATCCGATAATCTTTGTCTTTTTTTTTTTTTTGGAAATGGAATCTTGCTCTACCACCTGGACTGGAATGCAATGACGTGATCTCAGCTCACTGCAGCC
TCCACCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTATAGGCACCCGCCACGATGCCCAGCTAATTTTTGTATTGTTAGT
AGAGACGGGGTTTCACCATGTTGGTTAGGCTGGGGGAGTTTTCTATTATTTATTTCTTGTTTAATTTTGGTATAGCCAGAGAACATGCTTTATGTGGTTT
TATTAAAAATTGTTAGTTTATTTTATGACCCAGAATATGATCTATCTGGGTATATGTTCTGTGGGCACTTGGAAAGAATATGTATTCTGTTGTTCTTGGG
TAGAGTGTTTTTTGTAAATGTCCATTATATTAAACCAGTTGATAACGTTATCCAGGTTTGATATATCCTTTTTGATTTCCATCTATTTGTTTATCAGTCA
TTGAGAATGGACTTATTGAGTCTCCCAGTTATGACTGTGGATTTTTCCATATCTCTTTTAGTTCTATCAATTTTTGCTTCATTTATTTTGGATCTTTGTT
AGTTGCATATTATATTTCAGTGTTTATCTTCTTGGTGAATTGACCCTTTTATCATTATGTAATTTCCCTATATTTATATCTTTATATTTAAAATAGGTTT
CCTTAACATTTGAGAAGTAAAAATAAAATAAAATGTAATAGC

Expression



Full and truncated open reading frames discovered in TCONS_00065859

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.