Detailed information on ENST00000600539

lncRNA-RNA interactions

Number of interactions: 2

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00184486 guanine nucleotide binding protein (G protein), beta polypeptide 4 novel protein coding ENST00000600539 1937 739 UTR3 Trans
TCONS_00184486 guanine nucleotide binding protein (G protein), beta polypeptide 4 novel protein coding ENST00000600539 2664 965 UTR3 Trans

Sequence

>TCONS_00184486 (1696 nt)
AAGATGGTCCAACCTGTGGGTATTTTTAAAAATTCTAACAGGAGAAATCATTTAAAATTTTGCTTTTTCACAATGGCAAAAAGGAAAGAATTTGAACATA
ATATTTAATTTTTAAAAAAATTCAGCCTGACTCCGACCCTGAAGATTTCAGAAAGAACATCGTCACTATTAAAATGATGACAGGCCCAAATGGGGGATTG
TTTAACCAGTTTTCCTAAGTTAAACCAAGAATAAGCCACAAGTATTCAATTGTGTTACAACTTAGATCTGAGACATTTACATCAAAGCATACTTCCCTGA
ACATGTTCACATTTAAAATGCTTAAGGTCTTATTATTAAATCCAAAATACCAAAAGTATTAGAGGAGCTAGTTATACAATATTGGCACAGCATTTTTAAG
CAATAATAAAAGTTTCATTTTGTCACCTTAAGTCAAGATCCATTTATCTATTAATAGGTTAAGTCTGAAATTCTGTAACATATTCTAGAAGCACCTACAT
CCATTATTTCCAGGAGACTAGTTTACTACTATCATGCAATCGCTGAGGTCATATGAGTCTAAAATGAAGGGAATTGCTGAACAGGCCCTTTTGCTGTTGA
GATATGAAGCCCAAATCTTTGCCTCTGAAGACGGAATTCAATGTGGTGTGTGTAATCACAAGTAAAAACTTGAGCTAGGGAGGAACCTTGGATATTCAGT
CTACATCTCAAACAGCATAGCTGCCAAAAATGAGGCCTGTCCATTAAAGTGGAGGAGATATCCTTGCTGATGGCAAAAACTGCTTTTTCTTTTTGGGACG
GAATCTTGCTCTGTCGCTCGGGTTGGAGTGCAGTGGCGCCATCTCAGCTCACCAAAACCTCCACCTCCTGAGTTCAAGTAATTCTCTGCCTCAGCCTCAC
GAGTAGCTGACAGGCGCCCACCTCCACGCCCGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTGCAATGAGCCAAAATCACACCACTGTACACTCCAG
CCTGGGTGACAGAGTGAGACTCTGTCTTTAAAAAAAAAAAAAAAGGAACATTAACTGCAATATTCTTGATGATGCAAATTTTTAAAAACTAAATCCAGCC
AGATTTTTCAGCCTTAAAAACTAAGATCCAAACTATTCAACATCTCTACAAATTATATACTCATTGAATTCAGGAACAATAACAGAATTCAACAATCAGC
TCAACTTAAACTGTAAGTAAACAAATATATTTAGCAACTGGAGCCCCTATTATTAGAAAGCAAAGGTGTAACCATGAAGTAATTGTGGTAGTGAGGCTAC
TCTGTCGCCATTTGTTTATGTGTATAATTAACCACAAGTGTTAAATAGTTTTTAGTTGCCGAGTAAATATTTAATTATGGGAATTGCTTTAAACTCCTCT
TCATAAACTTTAAGAACATTAAAATAAATGTAATTTTAAAATATGTTAAGACCATAGAATTCCTGTGGTCTGTATGCCTGTGACTACTATAATAACTTTT
AAGTAGAGGAGATACTCTCTTACATATTTAAGGTTATTTTTATGCATAATAGAATTGCTTTCTTCTGACTAACCTACATGGCAAACTTTCCCCAACCCTC
TTTTTCTGGAAATGAATACATTCCTTTATTCTTTTCTCAAAGAACTGTTCTTTATGAAGTGATATAAATAGCCTACAAATAAACATTAATAGCAAAA

Expression



Full and truncated open reading frames discovered in TCONS_00184486

In silico ORF/peptide predictions
Nothing found.


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

No hits found.