| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000292069 | zinc finger protein 667 | protein coding | ENST00000600590 | 540 | 290 | UTR3 | Trans | |
| ENST00000304748 | formyl peptide receptor 1 | protein coding | ENST00000600590 | 522 | 290 | UTR3 | Trans | |
| ENST00000345714 | serum/glucocorticoid regulated kinase family, member 3 | protein coding | ENST00000600590 | 618 | 315 | UTR3 | Trans | |
| ENST00000424496 | sense_intronic | sense intronic | ENST00000600590 | 605 | 286 | noncoding | Trans | |
| ENST00000504904 | zinc finger protein 667 | protein coding | ENST00000600590 | 540 | 290 | UTR3 | Trans | |
| ENST00000591790 | zinc finger protein 667 | protein coding | ENST00000600590 | 540 | 290 | UTR3 | Trans | |
| ENST00000592189 | zinc finger protein 667 | nonsense mediated decay | ENST00000600590 | 540 | 290 | UTR3 | Trans | |
| ENST00000621141 | G protein-coupled receptor 1 | protein coding | ENST00000600590 | 563 | 299 | UTR3 | Trans | |
| ENST00000623752 | TEC | TEC | ENST00000600590 | 660 | 287 | noncoding | Trans | |
| TCONS_00010507 | SET and MYND domain containing 2 | novel protein coding | ENST00000600590 | 545 | 293 | UTR3 | Trans | |
| TCONS_00016418 | ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 | novel protein coding | ENST00000600590 | 540 | 295 | UTR3 | Trans | |
| TCONS_00030588 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | ENST00000600590 | 599 | 287 | UTR3 | Trans | |
| TCONS_00030591 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | ENST00000600590 | 616 | 301 | UTR3 | Trans | |
| TCONS_00030591 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | ENST00000600590 | 658 | 287 | UTR3 | Trans | |
| TCONS_00030591 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | ENST00000600590 | 573 | 296 | UTR3 | Trans | |
| TCONS_00030592 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | ENST00000600590 | 616 | 301 | UTR3 | Trans | |
| TCONS_00050195 | FYVE, RhoGEF and PH domain containing 4 | novel protein coding | ENST00000600590 | 635 | 285 | UTR5 | Trans | |
| TCONS_00065097 | UBA domain containing 2 | novel protein coding | ENST00000600590 | 514 | 239 | UTR3 | Trans | |
| TCONS_00065859 | ubiquitin specific peptidase 12 | novel protein coding | ENST00000600590 | 635 | 286 | UTR3 | Trans | |
| TCONS_00076763 | protein phosphatase 1, regulatory subunit 13B | novel protein coding | ENST00000600590 | 616 | 299 | UTR3 | Trans | |
| TCONS_00102930 | suppressor of cytokine signaling 7 | novel protein coding | ENST00000600590 | 613 | 299 | UTR3 | Trans | |
| TCONS_00102933 | suppressor of cytokine signaling 7 | novel protein coding | ENST00000600590 | 613 | 299 | UTR3 | Trans | |
| TCONS_00116668 | desmoglein 3 | novel protein coding | ENST00000600590 | 603 | 302 | UTR3 | Trans | |
| TCONS_00135631 | zinc finger protein 841 | novel protein coding | ENST00000600590 | 604 | 299 | UTR3 | Trans | |
| TCONS_00142157 | LY6/PLAUR domain containing 6B | novel noncoding | ENST00000600590 | 602 | 285 | noncoding | Trans | |
| TCONS_00142168 | LY6/PLAUR domain containing 6B | novel protein coding | ENST00000600590 | 602 | 285 | UTR3 | Trans | |
| TCONS_00147093 | ATPase family, AAA domain containing 2B | novel protein coding | ENST00000600590 | 623 | 288 | UTR3 | Trans | |
| TCONS_00148450 | coiled-coil domain containing 88A | novel protein coding | ENST00000600590 | 604 | 285 | UTR3 | Trans | |
| TCONS_00186316 | KIAA0232 | novel protein coding | ENST00000600590 | 633 | 301 | UTR3 | Trans | |
| TCONS_00190999 | zinc finger protein 721 | novel protein coding | ENST00000600590 | 653 | 299 | UTR5 | Trans | |
| TCONS_00213182 | tubby like protein 4 | novel protein coding | ENST00000600590 | 603 | 300 | UTR3 | Trans | |
| TCONS_00224728 | caldesmon 1 | novel protein coding | ENST00000600590 | 605 | 281 | UTR3 | Trans | |
| TCONS_00226572 | diacylglycerol kinase, beta 90kDa | novel protein coding | ENST00000600590 | 542 | 273 | UTR3 | Trans | |
| TCONS_00226753 | cell division cycle associated 7-like | novel protein coding | ENST00000600590 | 646 | 299 | UTR3 | Trans | |
| TCONS_00235205 | epithelial splicing regulatory protein 1 | novel protein coding | ENST00000600590 | 604 | 302 | UTR3 | Trans | |
| TCONS_00235219 | epithelial splicing regulatory protein 1 | novel protein coding | ENST00000600590 | 604 | 302 | UTR3 | Trans | |
| TCONS_00235231 | epithelial splicing regulatory protein 1 | novel protein coding | ENST00000600590 | 604 | 302 | UTR3 | Trans | |
| TCONS_00253055 | uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae) | novel protein coding | ENST00000600590 | 615 | 269 | UTR3 | Trans |
>TCONS_00253055 (1572 nt)
ATGCGGTTTGTGGTAACTGGTTCCAGCAGCCCTAGGAATCTAATACACTGCCCATGGAACAAATCCTTTCTTGACCACCAATGGCTGCATGACTTATCCT
GAGAAGATCATGGGGATTTTGGATGCCAGGTCAACCCTTACACTCAGCAAGGAAGTGGAAGGGCCTCAGTTTCAAACACTTTGTAAACACAGAGGTTATT
TTGAGGATCAAGTGAAACTTAGAAACAATAACAACAAAAAAAGCAAAGTCTGTGATCAAGAAGAATTACTCTGTTGCAACAATATAAACTAAGAAAAAAA
TACGCAAAATTCTCTGCTGCCTTGGGAGATGATCTCATGATGTGTATCATTTACTTTTAATATTTTTATTTATTTATTTTTGAGACGGAGTCTCGCTCTG
TCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAACCTTCGCCTCCCGGGCTCAAGTGATTCTCCTGCTTCAGCCTCCTGAGTAGCTGGGA
TTATAGGCATGTGCCGCCATGCCTGCCTAGTTTTTTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGTCAGGCTGCTCTCAAACTCCTGACCTTGTGA
TCTGTGCGCCTCAGCCTCCCAAAGTGCTGGGATTACTGGTGTGACCGACCGTGCCTGGCCAATGTGTATGATTTAATAGCCAGCAGCAACAGGCCACTAA
CATGCCATCTGCTAACAGGGGCTCTAGCTATTAACATCAACAGAGCTAAAAACTCTTATGTCTGATCCCTTGCAAATGGCGAAGACCTGGCTGAGAATTA
TTATCTCATGCTTTCAGAGAAAACTTTGCTTGTCCTGCACTGAAAAATCTGGCTGCAATAATCACATGGAAGAAGGTATGTTTGTTGGCATGGTTCATGG
GCTGGCTTATGACTTCTAAGCAGAAGATACAAAATAATATAAAAATCCTGCAACATGCACAATGTAGCTGATATTCATGTTCTCTTTAAATATCTTAACA
CTGACTTACATATTTAAGGGTGTGGAGTCTTTGAGCTTGGGAAGCATCTTATTACTGAGGTACAAATGCTAAAAGAGGGACATTTCTTCTATCTACCGCA
TTTTCAATGAAAAGATGCTGAAGGTGAATAAACAGCTCTGCAAACCCAGTTTTGTTTAACTTGGCAACAGCAGTAAGTAAGTATCACTGGACACAGAGAC
ACTGGAATAGATTCAGTCTTTAGTCTTATTCATCACGTCTGACCTTGGGCATATTACATGGTTTTCCTGAGCCTATGAAATCATGCGGCTGAACGAGCTG
AAAACTAAGATTCTTTCCTTTGCTAATAAATTTCAGCAAACGATAGGAGTAAGAACGGCTGTCTAACGAGACTACCAAATGCTACGAGACGCAGCAAGCA
ATGTCCCTTTACCTAATGGATACAGCTTCTTAACTGTTTATCCAAAGTCTCCCCAAGCAAATTCTAAATTATTCTAAATTATTTGAGTAACAAAGATTGG
GCCCTTATACCTGTGACGTGTCTGGCAATGACAAAGAATGTGGAACATGGGAAGCATTTAATACATATTTATT
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.