| Potential function | Interacting transcript | Gene description | Transcript biotype | lncRNA id | Alignment score (LAST) | Alignment length | Transcript region involved in interaction | Genomic orientation of interacting RNAs |
|---|---|---|---|---|---|---|---|---|
| ENST00000338758 | parvin, beta | protein coding | ENST00000600850 | 612 | 303 | UTR3 | Trans | |
| ENST00000439138 | transmembrane protein 98 | protein coding | ENST00000600850 | 540 | 289 | UTR5 | Trans | |
| ENST00000463899 | N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase) | processed transcript | ENST00000600850 | 504 | 292 | noncoding | Trans | |
| ENST00000498813 | delta(4)-desaturase, sphingolipid 1 | processed transcript | ENST00000600850 | 568 | 311 | noncoding | Trans | |
| ENST00000608958 | SET domain containing (lysine methyltransferase) 7 | protein coding | ENST00000600850 | 501 | 295 | UTR3 | Trans | |
| ENST00000620139 | melanoregulin | protein coding | ENST00000600850 | 566 | 301 | UTR3 | Trans | |
| TCONS_00001821 | low density lipoprotein receptor adaptor protein 1 | novel protein coding | ENST00000600850 | 619 | 287 | UTR5 | Trans | |
| TCONS_00001823 | low density lipoprotein receptor adaptor protein 1 | novel protein coding | ENST00000600850 | 619 | 287 | UTR5 | Trans | |
| TCONS_00030591 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | ENST00000600850 | 630 | 295 | UTR3 | Trans | |
| TCONS_00030591 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | ENST00000600850 | 571 | 295 | UTR3 | Trans | |
| TCONS_00030592 | cytoplasmic polyadenylation element binding protein 3 | novel protein coding | ENST00000600850 | 630 | 295 | UTR3 | Trans | |
| TCONS_00085508 | neuregulin 4 | novel noncoding | ENST00000600850 | 603 | 299 | noncoding | Trans | |
| TCONS_00090929 | nucleoporin 93kDa | novel protein coding | ENST00000600850 | 587 | 311 | UTR3 | Trans | |
| TCONS_00090939 | nucleoporin 93kDa | novel protein coding | ENST00000600850 | 587 | 311 | UTR3 | Trans | |
| TCONS_00090941 | nucleoporin 93kDa | novel protein coding | ENST00000600850 | 587 | 311 | UTR3 | Trans | |
| TCONS_00095053 | epithelial membrane protein 2 | novel protein coding | ENST00000600850 | 565 | 285 | UTR3 | Trans | |
| TCONS_00116668 | desmoglein 3 | novel protein coding | ENST00000600850 | 606 | 302 | UTR3 | Trans | |
| TCONS_00141667 | Rho guanine nucleotide exchange factor (GEF) 4 | novel protein coding | ENST00000600850 | 604 | 288 | UTR3 | Trans | |
| TCONS_00141679 | Rho guanine nucleotide exchange factor (GEF) 4 | novel protein coding | ENST00000600850 | 604 | 288 | UTR3 | Trans | |
| TCONS_00184373 | neutral cholesterol ester hydrolase 1 | novel protein coding | ENST00000600850 | 626 | 300 | UTR3 | Trans | |
| TCONS_00211226 | antisense | novel protein coding | ENST00000600850 | 640 | 303 | UTR3 | Trans | |
| TCONS_00226586 | diacylglycerol kinase, beta 90kDa | novel protein coding | ENST00000600850 | 531 | 296 | UTR3 | Trans | |
| TCONS_00226588 | diacylglycerol kinase, beta 90kDa | novel protein coding | ENST00000600850 | 531 | 296 | UTR3 | Trans | |
| TCONS_00240688 | metastasis suppressor 1 | novel protein coding | ENST00000600850 | 608 | 289 | UTR5 | Trans | |
| TCONS_00247058 | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 | novel protein coding | ENST00000600850 | 602 | 282 | UTR3 | Trans |
>TCONS_00247058 (1977 nt)
GACAGAGTCTCGCTTTGTCACCAAAGCTGGAGTGCAGTGGCCTGATCTTGGCTCACTGCAACCTCCACCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGC
CTCCTGAATAGCTGGGACCACAGGCACACGCCACCACGCCCGGCTAATTTTTATATTTTTAGTAGAGATGGGGTTAGTAGAGATATAGTATGTTGGTCAG
GTTGGTCTTGAACTCCTGACCCTGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGCGCGCCACAACGCCCGACTAATAGAAGCCTCTGGA
GCCCCTTCCACGTGCACGGTGGTGTGGGAGAGACACGAACAGCAGACATGCATCCAGTGCTCAGACCTGCCTGCCGGGAGGCAGAAGAGAGCAGGCCACA
AGAATAGGCCGGGCCTGGTGGCTTTCACCTCTAATGCCAGCACTTTGGGAGGCCCTGGCGGGAGGATTGCTTAATGCCAGGAGTTTGAGACTATCCTGGG
CAACACAGCGAGACCCTATCTGTAAAAAAAAAAAAACAAAAAATAAAAAAATTAGTTGGATGTGGTGGTAAACGCCTGTAGTCCCAGCTGCCCAAAAGGC
TGAGGCAGGAAGATCCCTTGAATCCGGGAGTTTGAGAGTACACTGAGCTATGCTCACACCACTGCGCTCCAGCCTGGGTAACAGAGTGAGACCCTGTCTC
TAAACAGACAAAAAAAAGAATGAGACAGGTAGTAGTTGCCGTAGAAGGTGGAAGGTGGAACCCACAGCCGGGAGCTAACTGGGTAATTAACGTGAATTGT
AGCTGGTCACATCCAGTTTTTTTTTTTTCTTTTTGAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAGTTCACTGCAACCT
CTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTATAGTGCGCCACCATGCCTGACTAATTTTTCTATTTTTAGTAGAG
ATGGGGTTTCACCATGTTAGCCAGGCTGGTCTCCAACTGCTGACCTCAAGTGATCTGCCCGCCTTGACTCCCAAAGTGCTGGGATTACAGGCGTGAGCCA
CTGCACCCAGCTGGGTGACTTTTTTTATTGCCTCTCTGAGAAGGTTAAGCCTGCCTCTGAATTATTGTCAGGAAAACAGTGTCATCAGGTCAGTTCTCCA
GCAAAAAATCTTTCCTCCCAGTTATCGGGAGGAAATGATCTACTTGAATGATACTAAAGATAGAATCTGTTGTTTTTGGCGACCTTATGAGCACATTTCA
ATCCTAATCCAAAGGATTTTCATTGAACTAGTTCACTAATAATCTGGCCAACGAGGAAGACAAAAAGGGCTGACCCTAAAAAGACAATTCCCATCCAAGC
AGAGAGAGAGATGGAGTTACTCACGCCAAGTCAGAAAGTCATTTTCGGGGGCATTTGGAAATCTTTGGAGTGAACTTCCCGATGCTATGAACATTGTTTG
AGACCCTGGAGACACTGCCTGTGTCACTGTGGGTTTCCCAGCTTCCAGCCGGGGAACTCCAGACTCCAGCCGGGGACAGCTGGGTGTGGAGGAGCGGATG
TGGAGGCAACGCCAGCAGCACAAACAGCAGCTCTCCTCCCGGCCGGCAGACACATGGAAGGACAGCCTCTTTCAGCCTCATTCAGCCGCGAGCCAGAAAT
GCTCCAATTGTTCAGAAGACCCTGGGCGACTCAGCACCGGATATGAGCGCACATTCTGCCAGGAGGACGTTGTCAGGAGCCACGCGTGGCTCATCTGTTT
TTGACACAGAGGGGATATTGATGACCAGCCACTGATTTCAGAAGACAGAGAAGGGGTGCTTTCCTCTCTGGAAGGAGGGGAAACTTCAAAGCAAACAATG
CTCCAAAGAAGAAAGGAATCGGTTGTTCTAGAACTAAAGAAGGGAAATGACAATCCGTCTCTTTAGACCTTAGAGAAA
In silico ORF/peptide predictions
Nothing found.
RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.