Detailed information on ENST00000602585

lncRNA-RNA interactions

Number of interactions: 1

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00251973 G protein-coupled receptor 34 novel protein coding ENST00000602585 518 291 UTR3 Trans

Sequence

>ENST00000602585 (2389 nt)
TTTAAAATAGTTTACCTGGCCCGTCATGGTGGCTCACGCCTGTGATCCCAGCACTTTGGGAGGCCGAGGTGGGCAGATCACCCACGGTTGGGAGTTCGAG<br />ACCAGCCTGGCCCGCATGGCGAAACCCCCATCTCTACTAAAACTACAAAAATTAGGCATGCTGGTGGGTGCCTGTGGCCCCAGCTGCTCAGGAGGCTGAG<br />GCAGGAGAATCGCTTGGATTCGGGAGGCGGAGGCTGCAATGAGCCAGGATTGTGCCTCTGCACTCTAGCCTGGGTGACAGGGCAAGACTCCATCTCAAAA<br />AATAAAAATAAAAATAGTTTATCTGGGTGGGCATTCCAAAATTTCCGCATAGATGATCACGTGAAACAATCACTGTGCTAAATGTGGAGGAAAATTCATC<br />ACGATAATCACAAAATTTGTATCAGAAAAAAATTACAAATGTACTTTGTTTCATGTAATTTTATGAGTTGGAAGTATTTTCTTAAATTGGAACACTATAA<br />GATAATATCTTTAGGAAATGGATATGCCACAATAGGAAGTATAGTGGGGCAAGTCTTGTTTTTCTCAAGGGAAAAGCCACCAGCCTGCTTTCATAGGCAT<br />TGATAAAACCAGGAAGAAAATAAAGTCACAACCAAATAGTATACACTGTCTCTACTGAATTCTTCTAATTCCTTCCCAACAGAAGTCTAAATCCTGCTTA<br />GCCTAAACATATCTATAGCCAGCGATGGGCAAATTATATTTGCTGTCAGCATGATAGAATAAGAATCAGAAACCCCCCAGCAGTGGGGTAAGATCGTGCA<br />CTTCATCCCCTCAAAATGCTGTCAACCCCATTCCCTCTCCATGCCCTCAAACAACTGCACAGTCACTTGTTAGTGAATTTCTCGTTCAGCGTTTTGTTTT<br />TTTCTCTCCATACTTAAAGACCAAATCATTTGTTTGCTCTGAAGAAAAAGAAAAAACAAAACAAAACAAAAAACCACCCACCAAATCATTTGAAATCACT<br />ACCCGTTAAAAAAAATCACCAGTGGAACTAAACAGTTGAGTGGTTTGGGATGTGTTCGCCATTTCTGTGTTTGACCTACATGGCCTCTAGTTCTTTGGAC<br />CACTGTAACTGTGAAACCATGGCTTAATACTGTTAAAGACCCCAAGGCTCAACTCTGTAGCCAGGGTGTACCTCAGGCTGCACAAATATCACACCAGAAT<br />GTCACAATCATTCATTGCTCCAGCTACTGAGTGAACAGGGTGCAAGACAGCACTGGCTTGGGTTGTATTTTTGCAGCCAGTTAACTTTGCATCAGGTCTA<br />CACAGTCCTTGCAGCCTTTGATTTCTCCAGTTGTAGAGATTTGAAATGGGGTGCCCGGGTTCCTCTCGTTTTTCCTTCAACCTACCTAGCATGCATTTTA<br />CACACATTGGAGGAGTCTTATGCACTGTTTTTCTCTGTTGCTGATGGAGGCAAGAAGGCCTTCTAATTAGTCTAACTTAAACGGACGGGATTCACCTAAC<br />AAAAGCAAGAAGAAAAGCACAAGAACAGGTGTCTTAATGCATTTGGATAATTTATTTGGGGTGTGTGCGTGTGTGTGTGTGTCTTGGTGGAGGTGGGGGC<br />CGTGTTCTCACCAAGCCTTTTCATAATCAAGTTTGCTTTGCAAACTTTATGGCCTTACACCCAGCAGAACAGTCCTTGCTAATAAAAGGAGGATGCCCTG<br />TCACAGTTCTCTGTAAATTATCATGTGTTGGGAAGTTCTGTTGATGCTTAGTTTGATCTTCCATGGTGGACACATCTGTTCTGTATGTACAAGGCATTAC<br />ATGTGTGTTTTAGCGGATGGGAATTGAAGCCTTTCCACAGTCCTTGTGCTCTGAGATGGCTGTTGAGCTCTGCTCAGCTGTCGTAGCTGAATTCTTTTTT<br />TGTGCTGAACACTGGGCAGCCTCACCATGTTGTCAATGTGCTTCTGGGGCCCCTGTGACTGCTGCCAGATGCCATGCACACAAGCAGAGTGCCTTTGCAG<br />GTTTGTGCACCCCTTGGCGAGCTGGAACTGGGAGCCCTGTGGGGTGATCTCGCCTTCTCATGGGGGGTCGGGGAGGGGAGTGCCTATTTTTAATCTTGTC<br />TGTTTGTTGCACCATGGAAATCACTGTGATTTGTATATATGCCCTAGGAAATTTTTACTGCAGTCTAATTTATGTAATAATGTTGATTCCAGGTTTGTTT<br />AATAAAGCTTTGTATCTTTTAAGAAAAAAAAAACTGTAGCATGTAGAGGAAAGTGCACTGGGATAATCCAAGGCCAGGCTTTGAGGTTCCACCGCTACAT<br />TATGTGACTCTTAGTCTAAACCTTTTGGTGTAATTTCTTTGGTCTGATTATTTATAAGTAGCAGATAATAAATGAATTTTATACTACAA

Expression



Full and truncated open reading frames discovered in ENST00000602585

In silico ORF/peptide predictions
>peptide 1 (91 aa)
MLSMCFWGPCDCCQMPCTQAECLCRFVHPLASWNWEPCGVISPSHGGSGRGVPIFNLVCLLHHGNHCDLYICPRKFLLQSNLCNNVDSRFV

>peptide 2 (76 aa)
MGIEAFPQSLCSEMAVELCSAVVAEFFFCAEHWAASPCCQCASGAPVTAARCHAHKQSAFAGLCTPWRAGTGSPVG

>peptide 3 (73 aa)
MWRKIHHDNHKICIRKKLQMYFVSCNFMSWKYFLKLEHYKIISLGNGYATIGSIVGQVLFFSREKPPACFHRH

>peptide 4 (59 aa)
MGGRGGECLFLILSVCCTMEITVICIYALGNFYCSLIYVIMLIPGLFNKALYLLRKKKL

>peptide 5 (57 aa)
MVAHACDPSTLGGRGGQITHGWEFETSLARMAKPPSLLKLQKLGMLVGACGPSCSGG


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

Best hit to NONCODE v4:
NONHSAT051107 (Evalue: 0)

Best hit to Swiss-Prot:
sp|Q8N2A0|CX062_HUMAN (Evalue: 5.0E-17)