Detailed information on ENST00000602591

lncRNA-RNA interactions

Number of interactions: 4

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
TCONS_00148698 WD repeat containing planar cell polarit... novel noncoding ENST00000602591 859 804 noncoding Trans
TCONS_00148698 WD repeat containing planar cell polarit... novel noncoding ENST00000602591 769 652 noncoding Trans
TCONS_00156217 antisense novel protein coding ENST00000602591 1134 1174 UTR5 Trans
TCONS_00194686 E74-like factor 2 (ets domain transcript... novel protein coding ENST00000602591 629 934 UTR3 Trans

Sequence

>ENST00000602591 (1976 nt)
CACAGTTCATGGTAAAGCCCAAGACTGTACCTGCCCATCCACTGCCTTTTCCATGTATCCTGGAACTGAGCATAGACCTCTTCCCAGGCAGAGCTGACAG<br />CAAGTAAAGGAGATCATAATCAGGGGACCAAACAACTTTGTCTAAAGTGTGAATGTCACCTAAGGAGAAGCTGTGAGATCAGAAGGGTGGGGCAGAGGAG<br />CAGACACCATGAGGGAGAGTCCTTGGGGGTACATCTGCCAGACTGACACTGTCTGGCCTGGGCAGTGGAGGGGCTAGCAGGAACCACAGGTACTGGTGGT<br />GTGGCTACTACCGTTACAACTGCCTGTGCTTGGACATGGACCCTCTGCAATATGCGGCAGTTTCATTCATTGCCCCCTACATTCTACACCAAGTAGAAAT<br />GGAAGGCAATTGGATACTTCACAGACAAGATCTAAGTGGAGAAGGAATGCGTCCTGTGGCTGCAGAGATCCTTGGAGCTTGGAGGGGAGAGCTTGAGCCC<br />CACTGATGATGACCTCCCACAGCTCGCCAACTCAGCCCTCCCTAAGTCCCCATCGGGGGCCAATTCTCACTCTGGGGTTGGGGGGACTCCACCATAGCTC<br />ATCCATCATAGGGATGTTGGTATCTACTGTGGGTTGGGTAGGGCCGATGTGCTGAGGATGGCTCCCCCACAAGCAAGAGATGTGGATTTGGGGAGCTTCC<br />CATCTTGTGTTGAAGGAACATAACTCAGAATAATAAGAGCCAACTATAACAAACCCACAGCCAACATCATACTGAATGGGCAAAAGCTGCAGGCATTCCC<br />CTTGAAAAGTGGCACAGGATAAGGAAGCCCTTTCTCACCACTCCTATTCAATATAGTGTTGAAAGTCCTGATCACAGCAGTCAGGCAACAGAAATAATAA<br />AGGGCATCCAAATAGGAAGAGAGGAAGTCAAACTATCCTTGTTTGCAGACAGTATGATTCTATATCTAGAAAACCCCATAGCCTCAGCCCAAAAGGTCCT<br />TCATCTGATAATTTCAGCAAAGTTTCAGGAGACAAAATCAGTGTACAAAAATCACTAACATTCCTATACACAGTCGCCAAGCCAAGAGCCAAATCAGGAG<br />CACAATCCCATTCATAATTGCCACAAAAAAGAATAAAATACCCAGGAATGCAGCTAACCAAGGAAGTAAAGGATCTCTACAATGAGAATCACAAACGCTG<br />CTCAAAGAAATCAGAGATGACACAAACAAATGGAAAAACTTTCCATGCTCATGGCTAGGAAGAATCAATATCATTAAAGTGGCCATACTACCCAAAGCAA<br />TTTATAGATTCAATGCTATTCCTATCAAACTATCAATTACATTTTTCACAGAACTAGAAAAAACTTAAAATTCATATGGAACCAAAAAGCCTGAGTAGTC<br />AAGGCAATCCTAAACAAAAAGAACAAAGGTGGAGGCATCACATTACCTAACTTCAAACTACAGGGCTACCATGACCAAAACAGCATGGTACTGGTACAAA<br />AGCAGACACACAGACCAGTGGGACAGAATAGAGAGCCCAAAAATAAGGCCACAAACCTACAGCCATCTGATCTTCAACAAAGTTGACAAAAACAAGCAAT<br />GGGGAAAGGTCTCCCTATTCAATAAATGGTGCTGGGATAACTGGCTGGCCATATGCAGAAGATCGTAACTGGACCCCTTTTACTATGTACAAAAATTAAG<br />ATGGTTTAAAGAGTTAAAACCCAAAATTATAAAAATCCTGAAGATAACTTAGGCAATACCATTCTGGACATAGGAACTGGCAAATATTTCATGATGAAGA<br />CACCAAAAGCAATTGTAACAAAAGCAAAAATGGACAAATTGGATTTAAGAGCTTTTTCATAGCAAAATAAACAACAGGGCAGACAATCTACCAAATGACA<br />GAAAATTTTTGCAAACTATGCATCTGACAAGGGGCTAATATCTAGCATCTATAAGGAATTTAAACACAGTTACAGG

Expression



Full and truncated open reading frames discovered in ENST00000602591

In silico ORF/peptide predictions
>peptide 1 (65 aa)
MTKTAWYWYKSRHTDQWDRIESPKIRPQTYSHLIFNKVDKNKQWGKVSLFNKWCWDNWLAICRRS

>peptide 2 (56 aa)
MDPLQYAAVSFIAPYILHQVEMEGNWILHRQDLSGEGMRPVAAEILGAWRGELEPH


RiboTaper predictions from Ribo-Seq data (HEK293 cell line)
Nothing found.

BLAST search results

Best hit to NONCODE v4:
NONHSAT118306 (Evalue: 0)

Best hit to Swiss-Prot:
sp|O00370|LORF2_HUMAN (Evalue: 6.0E-81)